Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09148

FASTA Sequence
Unigene ID: UN09148Length: 1620 SSR 
GGCCATCCCCAAATCCCGTTCTGCGTCACGGTGGCGCTTTATTCTCACGGCGGAGCGCCTCACCGGTTGCAGACGGTGTCGTGATT
CCCTAACCTCACATCATCATCATCCTTTAGCTGAAGATGGGGCAGAGCATGAGCTTGGAGTGAGACTGGAGCACCAGGGTATCTTC
GCCTCCGTTCAGTGCGGAGACATCGCCACTGTTCGGAGAGCCATGTCCACGGATCCGAGTCTTCTGAACCAAACCACTCCTTACGA
TCGCCACTCCCTCCTCCACGTCGCTGCCGCCAGTGGTCAGATCGAGATCTTGTGTTTACTGTTGGAGAGATTTGCGAATCCAGATT
TGTTGAATCGTCACAAGCAGACACCGTTGATGTTGGCTGCGATGTACGGGAGGATCTCTTGCGTCAAGAAGCTTGCTCAAGTCGGA
GCTAATGTTCTGATGTTTGATTCCGCCAATCGAAGAACATGTTTGCACTACGCAGCTTACTACGGACATGCTGATTGTCTTCTAAC
CGTTCTCTCTGCTGCTCAGTCAAGCCCCGTTGCTGTTCATTGGGGATATGCGAGATTTGTGAATACCAGGGATGACAAAGGAGCAA
CAGCCTTGCATCTAGCTGCTAGGCAGAGACGTCCTGATTGTGTTAATGTTCTCTTAGACAGTGGCTCTCTTGTTTGTGCTTCCACT
AGCCTTTACGGCTCTCCAGGGAGCACACCTCTTCATTTGGCTGCAAGAAGCGGATCTATCGATTGCGTCAGAAAGTTACTTGCTTG
GGGTGCTGATCGTCTTCAGAGAGACGCTTCTGGGAGGATACCATATGTGGTTGCGATGAAACACAAGCACGGAGCATGTGGGGCGT
TGCTTAACCCCTCTTCTGCTGAGCCTCTTGTCTGGCCATCCCCGTTAAAGTTCATCAGCGAGCTTAACGAGGAGGCGAAACTTCTC
TTGGAGCAGGCTCTGATGGATGCTAACAGGGAGAGAGAGAAAACCATCCTCAAGGGAACTGCTTTCTCTTTACCGTCACCATCTTA
CTCCGACACTGCCTCGGATGATAACATGTCTGAGATGAGTGATTCGGAGCTGTGCTGCATTTGCTTTGAGCAAGCATGCACGATTG
AAGTCAAAGACTGTGGTCACCAAATGTGTGCACAATGCACTCTTGCACTGTGCTGTCACAACAAACCGAACCCAACTACTTCAACC
GTGACTCCACCTGTCTGTCCATTCTGTAGAAGTGTTATCTCACGGTTAGTAATCGCCCAGAACAACAACAACAACGACGACAGTAG
CAAGAGCCAGAGCCAGGGCCAAGACGAAGTTGTTGATCGTGAGGCAGTTGATGTCAGCTCTTCAAAACTCAGAAAGCATAGAAAAT
CGGTAAACCTTGGAGAAGAGAGCAGCAGTTTCATGGGACTATCAAGCATTGGATCGTTCGGGAAGATAACCGGCCGTGGCTCGGGA
AGGATCGCAGCCGACAACGAGCTGATGGACAAACCGATTCTGTGAGAATGTAATGAAATCAAATGATTGAAATAAGGAAAAGAAGA
AGTGAGTTTATGTAATGAGATCAATGATTTGTTGTTTCTTTTGATCAATTTGAAAAATGTTTTGTTGTCATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180450 putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana]20777e-231
AAK49587 putative RING zinc finger ankyrin protein [Arabidopsis thaliana]19934e-221
NP_001118406 putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana]18572e-205
XP_002283965 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]15633e-171
CBI16150 unnamed protein product [Vitis vinifera]15633e-171

Swiss-Prot top hits (Blast detail)Scoree value
Q94B55 Putative E3 ubiquitin-protein ligase XBAT3120971e-234
Q65XV2 E3 ubiquitin-protein ligase XB313766e-151
Q94CT7 Probable E3 ubiquitin-protein ligase XBOS3111732e-127
Q4JHE0 Probable E3 ubiquitin-protein ligase XBOS363112e-027
Q6KAE5 Probable E3 ubiquitin-protein ligase XBOS321883e-013

TrEMBL top hits (Blast detail)Scoree value
B9HPI2 Predicted protein15561e-170
B9GJP4 Predicted protein15076e-165
Q2TE73 Ring zinc finger protein14271e-155
A4UQV7 Ubiquitin ligase14054e-153
B8AWZ6 Putative uncharacterized protein13785e-150

Arabidopsis top hits (Blast detail)Scoree value
AT2G28840.1 ankyrin repeat family protein20989e-236
AT2G28840.2 ankyrin repeat family protein18783e-210
AT5G07270.1 ankyrin repeat family protein1694e-012
AT3G24530.1 AAA-type ATPase family protein / ankyrin repeat family protein1444e-009
AT5G14230.1 protein binding1256e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  17%
 
92  33%
 
83  50%

Unigene MembersMember information