Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09169

FASTA Sequence
Unigene ID: UN09169Length: 1621 SSR 
GAACCAAAAAGCTTTGTTGATGAATTCAATCATTCGCAAATGTAAGGCTTTATTTAAAAGCTTGTTTCAAGAGTTGTGAAAAAAAC
AAAAAAAAAAAGGAAAAGAGAAAAGAGAAAAGTCTCTCTTTTGATGTTATTGGAATAGGTTCGAAAGGCGGAAGCACTGGCGCAAT
GGTTTTCCATAAACACAAGTGATCACCGCCTGTGTTGTTGGACGAACTTTGAGTTCTTGGCGTCTTCCTCAGTGAATCCAGCGGTG
AGCTTGGTGATGAGGACGCCGGTTACGGCGAAACCGGTGAGAAACGGCCAGCAACGTTTCCATTCCCTCTTGAAGAACACTGGCCA
TGGATCGAACAACCTCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGAGTGCCATGAATTTGAGCGTGAACA
GATGCATCGCCGGTGGATCTTTCAGTTGCAGAATCAATAATGGTGCTGAAAAAAGGTTGGTCCGTGTTGCCAAGCACTGTGAGCTT
CAGAGAGGGAGAAGTTTAGGGTCTGATGCTCTCTCTTTAGAGAAGAAAGAGAGCACAAGTGCTAAACTTGCTATGTTTGGTAGTGG
TTTAGTAGGAGTGGCAAACTTGGTAACTCTTAGCTCAGCAAAGGCCGCAGACTTGAAATTGGTTGTCTTGGATCAAGCCACTTCCG
TTTACATCTTGGCTGAAGGGACGCTGGGAGACTCGCTTGGAAACTTCTTGTATTCGGCTAACCAACAAGCTAATGAAGCTGTTCAG
GATCAGCTCTCAGCTCTCAGTGTAACAAGTTTGGCAGTCATATTTGGGGCTGGACTTGTGACAAGTCTTTCTCCATGTACACTCAG
TGTTCTGCCTTTGACCCTTGGTTATATTGGTGCGTTTGGATCTGGCAAAAGCAGAGGTCAGGTTATTGGAGATGCAATTGCTTTCT
CACTGGGACTAGCAACTACCTTAGCACTTCTTGGGATAGTAGCCTCTTTTGCCGGAAAAGCATATGGACAAATAGGACAGGGACTA
CCAGTAGCTGCATCAGGTCTGGCTATTGTAATGGGTCTCAATCTCCTTGAGGTGATCCAACTCCAGCTTCCATCTTTCTTTGACAA
CTTTGATCCTCGCGCAGCAGCAGCAAACTTCCCATCTAGTGTACAAGCGTATCTAGCGGGTCTCACCTTCGCATTAGCTGCCTCAC
CTTGTAGTACTCCAGTTCTAGCCACCCTTCTTGGCTATGTGGCTACTTCCAAGGATCCAGTAATAGGTGGAAGCTTACTATTGACG
TATACAACAGGTTACGTTGCTCCACTCATCCTCGCTGCTTCTTTCGCAGGAGCTTTACAGAGCTTACTCTCGTTTCGAAAAGTCTC
TGCATGGATCAATCCCATAAGTGGTGCTCTTCTACTTGGAGGAGGTTTGTATACTTTCTTGGATAGGCTTTTCCCTGCTGCCACTA
TGGTCATGTAAATATTTGTTACTAAGAAGAATCACATACTCATTTCTACCCAAAAGAAAACAACAAAGGGTGTGTGTATAGTATTA
TAAAACATTCATATTGATTAATAATGTAAAATCTTAAAAACAAGCAAACAATAGAATCGATCACTACTCACCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001190537 cytochrome c-type biogenesis ccda-like chloroplastic protein [Arabidopsis thaliana]15411e-168
NP_200240 cytochrome c-type biogenesis ccda-like chloroplastic protein [Arabidopsis thaliana]15382e-168
AAK93606 putative cytochrome c biogenesis protein precursor [Arabidopsis thaliana]15321e-167
AAM64755 cytochrome c biogenesis protein precursor [Arabidopsis thaliana]15283e-167
XP_002864324 cytochrome c biogenesis protein family [Arabidopsis lyrata subsp. lyrata]15257e-167

Swiss-Prot top hits (Blast detail)Scoree value
Q9M5P3 Cytochrome c-type biogenesis ccda-like chloroplastic protein15389e-170
Q2QY07 Cytochrome c-type biogenesis ccda-like chloroplastic protein 211364e-123
Q2RAR6 Cytochrome c-type biogenesis ccda-like chloroplastic protein 111355e-123
P51364 Putative cytochrome c-type biogenesis protein dbsD-like3263e-029
Q1XDC3 Putative cytochrome c-type biogenesis protein dbsD-like2905e-025

TrEMBL top hits (Blast detail)Scoree value
Q6TGR9 C-type cytochrome biogenesis protein14995e-164
B9SYH7 Thiol:disulfide interchange protein dsbD, putative11851e-127
B9N580 Predicted protein (Fragment)11626e-125
Q7XY14 C-type cytochrome biogenesis protein11483e-123
Q8GZD1 Chloroplast biogenesis protein11431e-122

Arabidopsis top hits (Blast detail)Scoree value
AT5G54290.1 cytochrome c biogenesis protein family15396e-171
AT3G46430.1 unknown protein3012e-027
AT5G59613.1 unknown protein3012e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  20%
 
91  20%
 
71  20%
 
81  20%
 
61  20%

Unigene MembersMember information