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Information for unigene UN09183
| FASTA Sequence |
| Unigene ID: UN09183 | Length: 1054 |
| SNP | ACTCTCCCAGCTGCTGGTAGATTCTCTGCGACGACGTTTTGGGGAGATATGAAGAAGTATAACGCCACGTGGTATACTACTGTTCC
CACCATTCATCAGATCATATTGGACCGTCACGCGAGCCAGCCTGAGCAGGAGTACCCTAAACTTCGGTTCATCAGGAGTTGCAGTG
CTTCTTTGGCTCCGGTGATATTGTCCAGGCTTGAGGAAGCTTTTGGAGCACCTGTTCTTGAGGCTTATGCTATGACGGAAGCAACT
CACCTGATGAGTTCTAATCCTTTACCGGAGGAAGGTCCACACAAGCCTGGGTCTGTTGGGAAACCGGTGGGTCAAGAAATGGCGAT
CCTCAATGAGAAAGGGGAGATACAAGAGCCAAATAGCAAGGGAGAGGTTTGTATTAGAGGCCCAAATGTGACAAAGGGTTACAAGA
ACAACCCGGAGGCCAACAAGGCGGGTTTCGAGTTTGGGTGGTTCCACACAGGTGATATTGGTTACTTTGATTCTGATGGGTATTTG
CATCTGGTGGGTCGGATCAAAGAGCTTATTAACCGTGGAGGTGAGAAAATATCCCCAATTGAAGTGGATTCAGTACTCTTAACTCA
TCCTGATGTTTCTCAAGGAGTTGCGTTCGGGGTTCCTGATGAGAAATATGGAGAAGAGATTAACTGTGCGGTGATTCCAAGAGAAG
GAACAACAGTGACGGAAGAGGACATAAAAACGTTCTGTAAGAAGAATTTGGCAGCTTTCAAGGTGCCAAAGAGAGTGTTCATCACT
GATAGCCTCCCCAAAACTGCCTCCGGTAAGATTCAGCGTCGTATCGTGGCCCAGCATTTCCTCGAAAAACCCTAAATAAAACACTG
TACACCATCTTGCTGGAATCCTTCGGTGATGAGTCGTAGCTTGATACGCAAGTGGTTTTGGTCTCTCTATTTGTTTTTTTTCCCTT
TCGGGGTTTGTATGTTACGTGTCATATGTTATCATATGATTAAAAGTGAACATCTATCTTATTAAATCAGAAACATTACAACTTTT
TCTTAGTGGATTTTAAAAGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190468 AMP-dependent synthetase and ligase-like protein [Arabidopsis thaliana] | 1451 | 1e-158 |
| AAM65672 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] | 1451 | 1e-158 |
| XP_002877640 AMP-dependent synthetase and ligase family protein [Arabidopsis lyrata subsp. lyrata] | 1451 | 1e-158 |
| AAL29212 putative acyl-CoA synthetase [Capsicum annuum] | 1285 | 3e-139 |
| CBI22725 unnamed protein product [Vitis vinifera] | 1270 | 1e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74976 Putative peroxisomal-coenzyme A synthetase | 812 | 8e-086 |
| P38137 Peroxisomal-coenzyme A synthetase | 757 | 2e-079 |
| C5D6U5 2-succinylbenzoate--CoA ligase | 439 | 1e-042 |
| Q65FT5 2-succinylbenzoate--CoA ligase | 416 | 7e-040 |
| Q0DV32 4-coumarate--CoA ligase-like 1 | 415 | 9e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9Z5 4-coumarate-CoA ligase-like protein | 1451 | 1e-158 |
| Q9SMT7 4-coumarate-CoA ligase-like protein | 1451 | 1e-158 |
| Q946Z2 Putative acyl-CoA synthetase | 1285 | 2e-139 |
| B9ID90 Acyl:coa ligase | 1261 | 1e-136 |
| B9R9A8 AMP dependent CoA ligase, putative | 1250 | 2e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48990.1 AMP-dependent synthetase and ligase family protein | 1452 | 4e-161 |
| AT4G05160.1 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative | 404 | 1e-039 |
| AT1G62940.1 ACOS5 (ACYL-COA SYNTHETASE 5); 4-coumarate-CoA ligase/ long-chain-fatty-acid-CoA ligase/ medium-chain-fatty-acid-CoA ligase | 374 | 4e-036 |
| AT3G21240.1 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase | 351 | 2e-033 |
| AT4G19010.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | 350 | 3e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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