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Information for unigene UN09199
| FASTA Sequence |
| Unigene ID: UN09199 | Length: 1379 |
SSR | | GCAATCTCAAAACACAGTACAAACCCAATCTTTTAAAATTACAAACTGTTGGAAGTGAGAGAGAGAGAAACATTAGTGAAGTGGAT
ACAAACTGAAACAAATAAATAAAATAGCAATAGTGATCATCCCAACAAAACAAGGCTAAAACGCACATACTTTATCTAGCATATGT
TCCAATACAGAGTCTCCCCTTATCATTGTGATGGTGAGGAGATTGTGCATCATACTACTTTTCTTTTTTAAGCCCTGATCTCTCGA
CCAAATATCCAGCTGAAAGGTATGTCTCTTGCAGTGTCTTTGCCTCTCCCTTGAGCCCTCTCTTCCAGTTTGCGGATCCTAGCAGG
CAATTTACAGAGATAGTCCTGGGCCTTGTGTCCATCATCAGAGAGACCTGCCAAGTTCTCCACGTTCCACCGCCTGACAAGAAACT
CCAGTATATCAGCATAGTCCCTAGCAGTGTAGACACCAAGCCTCTGCGCCACGGAGGAGAAGTGCTCAAACAGATTGTCATCAGAG
CCATCGTACATCAGATGAGCAGGCATGGCTATCTTTTTCCTCATCATGTCAGCAAAGCCTACGACAGTGGTGTCGGGATCGATCTC
GAAAAGCTTCGAGTCCCCAAGCTTCTTTGCAAGTCCAGCAGTGTTTCCATGAGAGATGAAGGTAGCTCTCTCTTGAAAAGAAGTGT
AGATGAAACCCAAGTAAGGGTTGTTTTCAGTCTTTGGATCCATTCCAGAACCAATCAGATATTGAATGGTCTTTTCAATCTGCCTC
ATGTCCACTCTTCCAGAGAGGTAAAGATACTTGTTGAGAAGATCACCGTGCCTATTCTCTTCAGCAGTCCAAGCCCTCGTCCACAC
AGCCCAAGGAGTAGGACTCGCTCCGGTCTCATCTCTAACCCCATCCAATGTATTAATCATGGTCTGATAAGTTGGGAGTGCTTCCT
CTGTGATCATATCCCCAACAAGCACTACAAAGTAGTCATCAGAAAGCTCTTTGCACCTTTCTCTCAGCTCCTTGACTTGGTCGTAG
AACCCTTCTGACTCGGGTTCAGGGAGGAAATCAGTTGGTTGCCATGATTTCTCAACGGGTTTTAGGTAAGGGAGCAAGTTGTCGTT
AGCCCATCCTTCTAAGGACTTGAAGATCTCCAGCTTTTGTGGTGGCATTGAATATTTCACTTGAAGATGGACCTCACGTGGAGGGA
GATGCGGTTTCCTTCCATTGGTGACCTCTGTAGAGGCTGGACGGATGGTAGAAGACATGAAAACTCTAGACGATCTGTAGCCATGA
GGATGAGAAGAACGTTGATAAGCGAATGGGGATGAGGTAAAAGCGATCCGATCCATAGCCATAACCATTGCTTTTTTTTCCCTTCC
TCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871710 hypothetical protein ARALYDRAFT_909604 [Arabidopsis lyrata subsp. lyrata] | 1185 | 2e-127 |
| NP_186912 acyl-[acyl-carrier-protein] desaturase [Arabidopsis thaliana] | 1138 | 4e-122 |
| XP_002882244 hypothetical protein ARALYDRAFT_477504 [Arabidopsis lyrata subsp. lyrata] | 1137 | 6e-122 |
| AAM20635 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1135 | 1e-121 |
| AAM64846 putative stearoyl-acyl carrier protein desaturase [Arabidopsis thaliana] | 1131 | 3e-121 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41319 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 990 | 3e-106 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 979 | 5e-105 |
| Q01753 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 975 | 1e-104 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 972 | 3e-104 |
| Q42807 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 971 | 4e-104 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M879 Putative stearoyl-acyl carrier protein desaturase | 1138 | 3e-122 |
| Q8L468 Putative stearoyl-acyl carrier protein desaturase | 1135 | 7e-122 |
| Q8LBC6 Putative stearoyl-acyl carrier protein desaturase | 1131 | 2e-121 |
| Q8LA10 Stearoyl-acyl carrier protein desaturase | 1116 | 1e-119 |
| Q9LF04 AT5g16240/T21H19_160 | 1116 | 1e-119 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1138 | 2e-124 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1116 | 6e-122 |
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 952 | 6e-103 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 947 | 2e-102 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 825 | 3e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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