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Information for unigene UN09232
| FASTA Sequence |
| Unigene ID: UN09232 | Length: 1000 |
| SNP | AGAAACAAGCATATATCGAATATAATTTCAAAAAGCATGGAAAACGAGAGTCAGTTCTCAAAAGCTAAGTTTTCATTTTCCATTTT
TTTACAAGAGGCAAATGAAGATAACAAGCAAGCAGAGCATATAGTTCATCTGTTGTGCTGCTTTTATTTAAGCAACACTGAAAGAA
GTGGCTGCTTTCTCGACGAATTTATTGGCTCCCTTGAACCACCTCTTGTCTCCAGCTTGTGCTTTGCAGATATAAAGCTTGCCTCC
ATTCACAGTAGCTGTGATCAGCTGATGCTTACCACCTTCGTCTCCATCGGCTGTTCTCGTCAACACAGACAAGTAATAGTATGGTT
TCCCACCAACTTCCTGAATATTCGTCTCCAGAATGTTTGCTGTTGCCACTGCATTGTTGTCAAACCCTCCCTCAGAGGCAGTCTCA
CCGAAGTAAGCTTGTTTCCCTAGAAGGTAATTGACCTGAGAGAGGAACTCTTCAGGAGAACCGTAATCAGTGATGGACTTCTTGTC
GGTAGGAGTGACCATGACATTGAGATTGCTAGTAGCGTCGAAGTTGTCTTCATACCTAAGGACTTGTCCTGGATACTCAACCTCTC
TGCTTGGGTTCCACTTAGCTGGCACCTGCACTTGGAATCCGTCTCCACTGTACGCCGTGAAGTCTGTGTTTTGCTTTGGCTTCCCA
AACACATTTGCAGCTTCACCGTAGGCAGCATCGGCTGGAGACACTTTGGAACCAACCGCAGCGGCGCCGACGAGGAGTGTGAGAGC
GAGACGGCGAGAGACGGCGGAGGTATCGTTTTCGTGAGTCTGTTGTGCTTTACACACTAGTTTAGAGAGTGACACGTAGCGCTGGG
ATGATGAGGAAGGTGATGATGATCTCGCGGCGGAGGAGGCTAGTGCGCTTTGATGTAGGAAACACGCGCTGCTGTACGCCATCTTC
TCTGTCTCTTAAGCTCTGTGTTTGGTTGAAGTTATTATGATGAGAGTGTGGGCC
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| GenBank top hits (Blast detail) | Score | e value |
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| P11594 RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic; Short=OEE2; AltName: Full=23 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=23 kDa thylakoid membrane protein; AltName: Full=OEC 23 kDa subunit; Flags: Precursor | 1277 | 2e-138 |
| BAJ34178 unnamed protein product [Thellungiella halophila] | 1254 | 1e-135 |
| CAA68801 23 kD subunit [Sinapis alba] | 1225 | 2e-132 |
| NP_172153 oxygen-evolving enhancer protein 2-1 [Arabidopsis thaliana] | 1212 | 7e-131 |
| XP_002889614 oxygen-evolving enhancer protein 2 [Arabidopsis lyrata subsp. lyrata] | 1212 | 7e-131 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P11594 Oxygen-evolving enhancer protein 2, chloroplastic | 1277 | 9e-140 |
| Q42029 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1212 | 3e-132 |
| Q96334 Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) | 1080 | 6e-117 |
| Q7DM39 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1049 | 2e-113 |
| P29795 Oxygen-evolving enhancer protein 2, chloroplastic | 1017 | 1e-109 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q04126 23-kDa ploypeptide of photosystem II oxygen-evolving complex | 1039 | 6e-111 |
| B9S6F7 Oxygen-evolving enhancer protein 2, chloroplast, putative | 987 | 6e-105 |
| A9PGP9 Putative uncharacterized protein | 962 | 5e-102 |
| C6T8W8 Putative uncharacterized protein | 950 | 1e-100 |
| A9PHM0 Putative uncharacterized protein | 947 | 3e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G06680.1 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 1213 | 2e-133 |
| AT2G30790.1 PSBP-2 (photosystem II subunit P-2); calcium ion binding | 1052 | 1e-114 |
| AT1G06680.2 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 892 | 4e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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