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Information for unigene UN09289
| FASTA Sequence |
| Unigene ID: UN09289 | Length: 1143 |
SSR | | GGGTCTGATGGGGTAAATAAAAATCAAGAAAGGGAGACACAGACCCCGTTCTCTCCAAAATTGGCAAAACAAAAAAACTCCCAGAT
CCTCTTCTGTCTGGTTCCGTTTCTAAAATCGTGCTTTGATTCTTCTCTCCTCCAAAGATTATGGATCTAAAGGGACAGCTAGATAG
GTTCAAGAAACAGCAAGAACGATGCCAATCTACTCTCTCAAGCATCAATGCTTCCCGAGCACCACCTTCTGCTCCTTCCAGGCCCT
CCTCCTCCTCCTCTGTTCCTGCTGCCACCAGCCTCAAGCCTGCACCTCCCGTCAAATTCTCCAACGACACCGAGCGTCTTCAGTTC
ATCAACAGCATCAGGAAAGGTCCTGTCGGTGCTCAAATCAAACGTGTCATTGAGCTTCTCTTTGAGACAAGACAAGCCTTCACACC
GGAGCAGATTAACGAAAGGTGTTATGTTGATATGCTTTCGAATAAAGCTGTCTTTGATAGTCTCAGGAACAATCCCAAAGTTTATT
ATGACGGAAGAAGGTTCTCTTACAAGGCTAAGCATGATGTTAAAGACAAGAACCAGCTTCTCTCGCTGATCAAAAAGTATCCTGCT
GGGATTGTAGCTGTTGATCTCAAAGACGCTTACCCTAATGTCATGGACGATTTACAGGCTCTGAAAGCTTCAAAACACATATGGTT
CCTGTCGAACGCTGATTCACAAGAGGACATTGCTTACCCTAACGACTTCAAGGGGCAGATCGAGGTTGACGACGAGTTTAAATCTC
TGTTCCGTGACATAGACATTCCCAGCGACCTTCTTGATGTGGAGAAGGAGCTGCAGAAGATTGGTTTGAAGCCTGTGATGAACACT
GCGCAGAGGAGAGCCGCTGCACAGATCCAAGGGGTATCGAATAAACCCAAGCAGAAGAAGAAACAAGAGATCAGCAAGAGAACCAA
ACTCACCAACGCTCATCTTCCTGAGCTCTTCCAGAACCTCAACGCCAGCAGTTCCCGGAACTAATAAACTTCATAAATTGAATGAC
TGTTACTGGGAGATTGAGCCCAGTTTTTTCGTATTATTCAACATAATTTACACAGAACAAATGCAATTTGTATTACTGTATGAGTT
TACAATAGCTTTCATGTATTACAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867886 hypothetical protein ARALYDRAFT_492835 [Arabidopsis lyrata subsp. lyrata] | 1044 | 3e-111 |
| NP_193766 Transcription initiation factor TFIIE, beta subunit [Arabidopsis thaliana] | 1012 | 1e-107 |
| XP_002299546 predicted protein [Populus trichocarpa] | 1007 | 5e-107 |
| XP_002509755 Transcription initiation factor IIE subunit beta, putative [Ricinus communis] | 982 | 4e-104 |
| XP_002447069 hypothetical protein SORBIDRAFT_06g028040 [Sorghum bicolor] | 965 | 4e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29084 Transcription initiation factor IIE subunit beta | 170 | 3e-011 |
| Q9D902 General transcription factor IIE subunit 2 | 170 | 3e-011 |
| P29540 General transcription factor IIE subunit 2 | 169 | 3e-011 |
| Q2KJF9 General transcription factor IIE subunit 2 | 167 | 6e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SUP3 AT4g20330/F9F13_2 | 1012 | 9e-108 |
| B9GKK9 Predicted protein | 1007 | 3e-107 |
| B9RC71 Transcription initiation factor IIE subunit beta, putative | 982 | 3e-104 |
| C5YFL7 Putative uncharacterized protein Sb06g028040 | 965 | 3e-102 |
| B4FCN7 Putative uncharacterized protein | 959 | 1e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G20330.1 transcription initiation factor-related | 1016 | 2e-110 |
| AT4G21010.1 transcription initiation factor-related | 795 | 7e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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