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Information for unigene UN09299
| FASTA Sequence |
| Unigene ID: UN09299 | Length: 1193 |
SSR | | CCGTGAATAGATGACCTCTCAACTCTACAATGGCAAATGTTTCCACCCCAATTAGTGAGAAACTAAGAAAAGAAGTAACAGAAACT
ACAATTTATCTAATCCCAACTTGGTTTTACAGCAGAAAAGAAAATTCGACCATAACACAAGTGAAAAATCAAAAATAATTTCAACA
TCTCGAAAACGTTCTAAAAACAAACTATTTTTAATTATCACGTCTCGGTTGCCTTTTGCGAGGAGCAGCGGTTTCTTCCTTCTTCT
CCGTCTCATCTTCACTCTTTGAGCTCTCTCCTACTTCTGGTTTCTTCTTCTTCTTCTCCACAGTTGCTGCAGGCGCCGCCTTTTTG
CCACCGAAGATAAGCTTGATGAAGAGCGAGAAGAATACTACGACAATGGAGACGAGAACACCAATGGTTAGGTTTGGTTGTTCCTC
AGCTTTCTCGATCAGCTCGGTGATCTTAGACTTGTAGGCACTTAGGAAAGATATGTCTGCAACCTTGTTCAAGAGGTCGAACACAA
CCTTCTGGTAGCTCTTGAGACCACCTGCAGAGCTAGCAGCCTCCTCTTCCGCCTTTTGTTTCTCTTTCTCAACATCGAACTTCGGC
TTCCAAGTAGTCTGTCTGTAAACCTCAGCGACCTTCTCATCTTTCGCTATCAACATGTTGTCAAACAAGATACCGTCTTGCATCGT
CCAGATCTCAATACCGATCGCCGCAATGGGTTCGAAATCAGGTCGGTCTAGCTCAAAGTAGTCAGGGTTAGGGATGTCTCTGGGCT
TCCAGATCCCTTTGTAAGCAGGGTTGTCTATCATAGGTGCACTCCACTTGCCCTTGTAAGCAGGGTTCTTCTTCGTGGGTCTCTTC
CATTCACCGCAACCCGGTGCTGTTTCACACTTGGGGTTATCAACCTTTGGAGCCTCCCACATACCGTCTTCCTCGTCATCCCTCAC
TCTTGGCATGCTTCCACACACCTTCGTAATCACCATTCTTCGAAACGATCCAGCGACCATCGAACGGCTCATCGAACGACTCATAC
AACACCGCATCATCGTCGCAGAAGCAAAGGTTCTGAAGCGAGAAGAGAGCTAAGATAAGTAGAAGGCCGGAGAATAGTTGCCGGTC
TCTCATCTTCGGATTCCTCGGGATTTAGATCGGAGAAGAGAGTTAGAATGTTTTTTTTTTTCCTTAAGCTTTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAK84429 putative papillar cell-specific calnexin [Brassica napus] | 1185 | 1e-127 |
| NP_200987 calnexin 1 [Arabidopsis thaliana] | 1144 | 7e-123 |
| XP_002866454 calnexin 1 [Arabidopsis lyrata subsp. lyrata] | 1143 | 9e-123 |
| XP_002866455 hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp. lyrata] | 1143 | 9e-123 |
| NP_196351 calnexin2 [Arabidopsis thaliana] | 1001 | 3e-106 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29402 Calnexin homolog 1 | 1166 | 9e-127 |
| Q38798 Calnexin homolog 2 | 1001 | 1e-107 |
| Q39817 Calnexin homolog | 940 | 1e-100 |
| O82709 Calnexin homolog | 936 | 4e-100 |
| Q39994 Calnexin homolog | 774 | 2e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7XAF7 Putative papillar cell-specific calnexin | 1185 | 9e-128 |
| B7FLQ0 Putative uncharacterized protein | 961 | 8e-102 |
| Q5NT70 Calnexin | 942 | 1e-099 |
| Q4W5U7 Calnexin-like protein | 920 | 5e-097 |
| B9RA41 Calnexin, putative | 905 | 3e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61790.1 calnexin 1 (CNX1) | 1167 | 6e-128 |
| AT5G07340.1 calnexin, putative | 1014 | 3e-110 |
| AT1G56340.1 CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding | 223 | 2e-018 |
| AT1G56340.2 CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding | 220 | 4e-018 |
| AT1G09210.1 calreticulin 2 (CRT2) | 211 | 4e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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