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Information for unigene UN09307
| FASTA Sequence |
| Unigene ID: UN09307 | Length: 1218 |
SSR | | CAATAAGTGAAGTACTAGCCAACACTAGTCTCTTAAGACGTCATAAGCATTGGTAAAGTATCTTCTTGTTTACATATGGATGAGTT
TTTTTTTTCCGCTGTAATACATGAAAGCTATTGTAAACTCATACATCAATACAAATTGCGTTTTGGTCTATGTAAATTATGTCCGA
ATAATACGAAAAAAACTGGGGCTCAATCTCCCAGTAACAGTCTTCGAACCGACATAATCATATTCAATTTATGAAGTTTTTAGTTC
CGGGAACTGCTGGCGTTGAGGTTCTGGAAGAGCTCAGGAAGATGAGCGTTGGTGAGTTTGGTTCTCTTGCTGATCTCTTGTTTCTT
CTTCTTCTGCTTGGGTTTATTCGATACCCCTTGGATCTGTGCAGCGGCTCTCCTCTGTGCAGTGTTCATCACAGGCTTCAAACCAA
TCTTCTGCAGCTCCTTCTCCACATCAAGAAGGTCGCTGGGAATGTCTATGTCACGGAACAGAGATTTGAACTCGTCGTCAACCTCA
ATCTGCCCCTTGAAGTCGTTAGGGTAAGCAATGTCCTCTTGTGAATCAGCGTTTGACAGGAACCATATGTGTTTTGAAGCTTTCAG
AGCCTGTAAATCATCCATGACATTAGGGTAAGCGTCTTTGAGATCAACAGCTGCAATCCCAGCAGGATACTTTTTGATCAGGGAGA
GAAGCTGGTTCTTGTCTTTAACATCATGCTTAGCTTTGTAAGAGAACCTCCTTCCGTCATAATAAACTTTGGGGTTGTTCCTGAGA
CTATCAAAGACAGCTTTGTTCGAAAGCATATCAACATAACACCTTTCGTTAATCTGCTCCGGTGTGAAGGCTTGTCTTGCCTCAAG
GAGAAGCTCAATGACACGCTTGATTTGAGCACCGACAGGACCTTTCCTGATGCTGTTGATAAACTGAAGACGCTCAGTGTCGTTGG
AGAATTTGACGGGAGGTGCAGGCTTGAGGCTGGTGGCAGCAGGAACAGAGGAGGAGGAGGAGGGCCTGGAAGGAGCAGAAGGTGGT
GCTCGAGAAGCATTGATGCTTGAGAGAGTAGATTGGCATCTTTCTTGCTGTTTCTTGAACCTGTCTAGCTGTCCCTTTAGATCCAT
AATCTTTGGAGGAGAGAAGAATCAAAGCACGATTTTAGAAACGGAACCAGACAGGAGTGGATGTGGGAGTTTTTTGTTTTGTCAAT
TTTGGAGAGAACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867886 hypothetical protein ARALYDRAFT_492835 [Arabidopsis lyrata subsp. lyrata] | 1048 | 1e-111 |
| XP_002299546 predicted protein [Populus trichocarpa] | 1025 | 5e-109 |
| NP_193766 Transcription initiation factor TFIIE, beta subunit [Arabidopsis thaliana] | 1012 | 1e-107 |
| XP_002509755 Transcription initiation factor IIE subunit beta, putative [Ricinus communis] | 986 | 2e-104 |
| XP_002283557 PREDICTED: hypothetical protein [Vitis vinifera] | 981 | 6e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29084 Transcription initiation factor IIE subunit beta | 169 | 4e-011 |
| Q9D902 General transcription factor IIE subunit 2 | 169 | 4e-011 |
| P29540 General transcription factor IIE subunit 2 | 167 | 6e-011 |
| Q2KJF9 General transcription factor IIE subunit 2 | 166 | 8e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GKK9 Predicted protein | 1025 | 3e-109 |
| Q9SUP3 AT4g20330/F9F13_2 | 1018 | 2e-108 |
| B9RC71 Transcription initiation factor IIE subunit beta, putative | 986 | 1e-104 |
| C5YFL7 Putative uncharacterized protein Sb06g028040 | 969 | 1e-102 |
| B4FCN7 Putative uncharacterized protein | 963 | 5e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G20330.1 transcription initiation factor-related | 1022 | 4e-111 |
| AT4G21010.1 transcription initiation factor-related | 791 | 2e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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