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Information for unigene UN09313
| FASTA Sequence |
| Unigene ID: UN09313 | Length: 1098 |
SSR | | GTGAGAAAACGATTTGCTGAGAAAGAGAGATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAGTTTTCAAGATTT
AGAAGCTGGAAGAGGAAGATCGAGGAAGACCAATGGTGGTGGTGGAGGTCGGCAACAAGATTCGACGCAAGCCGTGGCTTCGGGAA
TATTCCAGATCAATACCGGAGTTTCCACGTTTCAGCGGCTCGTCAACACGCTCGGTACTCCCAGAGACACGCCTGAGCTCCGTGAT
AAGCTGCACGAGACACGGTTGCATATAGGGCAGCTTGTGAAGGACACGTCAGCTAAACTTAAAGAAGCTAGTGAAACTGATCATCA
AACTGGTGTCAATCCAAGTAAGAAGATTGCAGATGCTAAGCTTGCAAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAAAAAGCTC
AGCAAACTGCTGCTGAAAGAGAAACTGCTTATGCTCCTTTGGTGCCTCCTTCTGCTCATCCCTCTAGCTATTCAGCGGGTGAAGTA
GATAATATCTCGGAACAGCGGGCGCAAGTTATGGAGTCGAAAGGGCAGGAGCTTGTGTTGTTAGACAACGAGATTGCATTCAACGA
GGCTGTGATCGAAGAAAGAGAGCAAGGGATACAAGAAATCCATACTCAGATTGGCGAGGTTAACGAGATATTCAAAGATCTCGCCG
TTCTGGTTAACGATCAAGGAGTCATGATAGATGATATCGGTACTCACATTGATAACTCTCGGGCTGCAACTTCACAAGGAAGATCT
CAGCTCGCTCAGGCCGCAAAAACACAAAGATCAAACTCGTCTCTGACATGCTTGCTCTTGGTGATATTTGGCATTGTACTCCTGAT
CGTGATAATCGTACTCGCAGCTTGATTTCGGAAACCGAGAACAAGTGGTTTTGAATGTGTTCATGGATCTTAAAGCATCAATGCGT
GAATTACTTAGTATATATAACGTAATTTGCATTCAAAACTTAGAAGTTGGGTTTTGTATTGGTTTGGTTTGGTACGGTTGTAATAT
AGTGCGTGAGTGGTTTTGTTGTGCAAACTGTGTTGGAGATGAGTGAAAGAAAGTCTGTTCTGTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863386 hypothetical protein ARALYDRAFT_494291 [Arabidopsis lyrata subsp. lyrata] | 1167 | 1e-125 |
| NP_568671 syntaxin-22 [Arabidopsis thaliana] | 1165 | 2e-125 |
| D71447 probable syntaxin - Arabidopsis thaliana | 1017 | 3e-108 |
| XP_002326741 predicted protein [Populus trichocarpa] | 1006 | 6e-107 |
| XP_002527645 syntaxin, plant, putative [Ricinus communis] | 1004 | 1e-106 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9MU58 Predicted protein | 1006 | 4e-107 |
| B9SNS6 Syntaxin, plant, putative | 1004 | 7e-107 |
| Q3HRZ4 Syntaxin-like protein | 1001 | 2e-106 |
| C6TA84 Putative uncharacterized protein | 995 | 8e-106 |
| Q8LJR4 Syntaxin | 992 | 2e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46860.1 VAM3; SNAP receptor | 1181 | 1e-129 |
| AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 909 | 4e-098 |
| AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 906 | 1e-097 |
| AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor | 806 | 4e-086 |
| AT1G32270.1 ATSYP24; SNAP receptor/ protein binding | 524 | 2e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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