 |
Information for unigene UN09322
| FASTA Sequence |
| Unigene ID: UN09322 | Length: 1223 |
SSR | | CTTCCAACTTCGATTATTGCAGTCTTCGACTTCCATTTACCTTTCTCACTCCATTAGCTCCTTCGTCTTCTCTCTCTCTCTCTCTC
GAGAGATTCACGTAACACAAAAGATTTGTGTAAACCCTCTCCATTGAAGATAATGGCGAAAACCAATGGAGTTATTATCTCGACGA
TAGACTTGGGGGAGGAGGTTTCATACAAGATCCTGAACCAGAAAATCCGCGAAGCGAGCGAGAGATGGGGGTGTTTCAGAGCGATC
AACCATGGAGTTTCGCTGTCTTTGATGTCCGACATGAAGAAGACCGTTATCGATCTCTTCGAACGTCCGCACGAGGTGAAAGTGCG
TAACGCAGACGTGTTACTAGGGAGTGGTTACAGAGCTCCTAATGAGATCAATCCTTATTACGAAGCGTTGGGTCTCTACGACATGG
CTTCTCCTCGAGCAGTCAACACGTTTTGTGACCAGCTCGAGGCTTCTGCGGATCAAAGGGACATAATGGTAAAATATGCGAAAGCT
ATCGATGGACTTGCAAAAGATTTAGCAAGGAGGTTAGCAGAGAGTTACGGCTTAGCTGATACAAACTTCTTTAAAGGATGGCCGAG
CCAGTTCCGGATCAACAAGTATCATTTCCAACCAGAAACGGTCGGGAAACTCGGTGTCCAGTTACACACCGATTCAGGCTTCTTGA
CGATTCTTCAAGACGACGAAAACGTCGGTGGGCTCGAAGCTATGGACCATTCTTCGGGAACGTTCTTTCCCATTAGCCCCTTGCCG
AACACTTTGGCTATCAACCTCGGCGACATGGCTACGATATAGAGCAATGGGAGGTTGTGCAACGTGAAGCATAGAGTGCAATGCAA
CGAAGCGAAGAGGTTTTCTATCGCTTCTTTTTTGTTAGGACCGATTGATACAGATTTGGAGCCGCCTAGTGAGTTCGTGGATGCCC
AACATCCCCGTCTATACATGCTATTAGTCACGACGGGATACGGAATATTAGAACGACTACGAAGATTCATGATGGAGAAGCTCTCA
AGCTTATAACCTATGAATGATGAATGACAGATTTTAAATGACGTGAAAAGCAAGGTTTAAAATGGTTGCAGAAAATTTTAGTATTC
CTGTTATGTATAAGTTCCACTAAGATTGAGAAATAGAGGTTGCAGACTTGTCTTAAATAATTGTTACAATTGAGATCTTTCTCTTT
GTGGATGCAATACTTCTCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172865 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1257 | 6e-136 |
| XP_002892789 hypothetical protein ARALYDRAFT_471571 [Arabidopsis lyrata subsp. lyrata] | 1219 | 1e-131 |
| XP_002892788 hypothetical protein ARALYDRAFT_334706 [Arabidopsis lyrata subsp. lyrata] | 1075 | 7e-115 |
| NP_172864 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1058 | 7e-113 |
| XP_002528538 Gibberellin 3-beta-dioxygenase, putative [Ricinus communis] | 850 | 9e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5K7 1-aminocyclopropane-1-carboxylate oxidase homolog 2 | 262 | 6e-022 |
| O49561 Gibberellin 2-beta-dioxygenase 8 | 253 | 7e-021 |
| Q05965 Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) | 236 | 6e-019 |
| Q84MB3 1-aminocyclopropane-1-carboxylate oxidase homolog 1 | 229 | 4e-018 |
| P41090 Naringenin,2-oxoglutarate 3-dioxygenase | 227 | 7e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI75 F7A19.21 protein | 1257 | 4e-136 |
| Q9XI76 Dioxygenase-like protein | 1058 | 5e-113 |
| B9SRB9 Gibberellin 3-beta-dioxygenase, putative | 850 | 6e-089 |
| Q2Z1Y9 2-oxoacid-dependent dioxygenase | 817 | 4e-085 |
| A5AW66 Putative uncharacterized protein | 812 | 2e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14130.1 2-oxoglutarate-dependent dioxygenase, putative | 1262 | 6e-139 |
| AT1G14120.1 2-oxoglutarate-dependent dioxygenase, putative | 1062 | 9e-116 |
| AT1G06640.1 2-oxoglutarate-dependent dioxygenase, putative | 262 | 5e-023 |
| AT1G04380.1 2-oxoglutarate-dependent dioxygenase, putative | 261 | 7e-023 |
| AT5G43440.1 2-oxoglutarate-dependent dioxygenase, putative | 254 | 4e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
