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Information for unigene UN09327

FASTA Sequence
Unigene ID: UN09327Length: 845  SNP
GGAAGCAAAGCCATTTCCCTCTTGTGCCGTGCCGTCGCCGTCTCCGTCGCCATTTCACTAACCGTCATATCCGGCCACCATTTTCA
ACTGTCGCTATCTACTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAGCAGCGTCCTTATGCAGAAGAGT
TAGTCTGAGGGAACTCATCACCGAGGTTCCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAGTTTGGTCT
TTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGAACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTC
GGAGGAGAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTTTCATCCGGGAGACTATGTGGGGATCGGGAA
GGACCATACGCTGTTTGCATTGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAATGGATTCATGTTGATC
CTAAGGGAGGTCATGTTCTTCACCCTATCTACACTAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGTGA
AAAAAACAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCACTTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACA
CTCAATTGAATAACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGATCATTCAAAGCAAAATAAGTTCTCTA
GAAGATTGTCAACTTTTTTTTTTCTCTCTTGTTTTTATTTAATGTCTCAAACTTCTAAAAAATCTTGCAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568310 large subunit ribosomal protein L27 [Arabidopsis thaliana]7304e-075
NP_565398 Ribosomal protein L27 family protein [Arabidopsis thaliana]7233e-074
XP_002873715 ribosomal protein L27 family protein [Arabidopsis lyrata subsp. lyrata]7223e-074
CAB89332 ribosomal protein L27-like [Arabidopsis thaliana]7125e-073
ACJ83890 unknown [Medicago truncatula]5772e-057

Swiss-Prot top hits (Blast detail)Scoree value
A9IM57 50S ribosomal protein L272883e-025
B4RZH4 50S ribosomal protein L272874e-025
B6EL42 50S ribosomal protein L272857e-025
A7N0G1 50S ribosomal protein L272822e-024
Q87SU3 50S ribosomal protein L272822e-024

TrEMBL top hits (Blast detail)Scoree value
Q94AC6 AT5g15220/F8M21_1107303e-075
Q9ZVX0 50S ribosomal protein L277232e-074
Q9LXF9 Ribosomal protein L27-like7123e-073
B7FGL1 Putative uncharacterized protein5772e-057
C6TCI4 Putative uncharacterized protein5701e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G15220.1 ribosomal protein L27 family protein7302e-077
AT2G16930.2 ribosomal protein L27 family protein7231e-076
AT2G16930.1 ribosomal protein L27 family protein7231e-076
AT2G16930.3 ribosomal protein L27 family protein7231e-076
AT5G40950.1 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27); structural constituent of ribosome2292e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  11%
 
75  56%
 
63  33%

Unigene MembersMember information