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Information for unigene UN09360
FASTA Sequence |
Unigene ID: UN09360 | Length: 1136 |
| SNP | AAAACCAAGATTTCCTTTTATATTTACCTTAAGCTTCCACCACTTTTCTTATAAAAAGACGTTGCTGTTACATAGATAGTTCCATT
CAAGATATGCAGCAAAAGAAAAACGCAGCAAATGCAAAATGTGTAATGCTGGTCACAGCTCTAAGTTTTGTTTCATCTTTTACACA
AGATTAAGTGAATTCGATTACTTGTACATAACTATTAAAGAAAAGAGAGATTGCAATATGATAATAAGTCACAATTCATTCCGCTA
CTTGTTCCAGGGCACCAATTTTCGTCTTCCATGAATCATCATCTAATCCACTAGCCTGTAATGGTGGCAACGAGAAGACGCTAACT
GTTGAGCTACCGCTGCGGATTTCCTTTAAAACCCTTAGAGCGGAGACAGTGCTCTTCATATACAAGCTCTCCATGTACTCAATCTC
AGACAAATCTTTTGGAAGTCTGAGAAGATCAGAACTGTTAGTTTCTGACTTGACAGTTCCAGACGTTGTTGGCTCTGATTTGTCTT
CCTCAAGATTCCGTTTTTTGTTAGACGGGAAGAGGCGGTCAAGCATAGCCTCACACTCTTTCACAAATGTGTTGAGCAGGTCAGTG
GTGAAGAAAGGTTCTTGCAGAACCTTTTGGATGAATGGTAGTCGGATAAGAGCACCGGTTCTTTTGTCGTACTTTTTGAGAATCTT
AGCTAACCCTGTATAATTGAGAGCACTATAATTCATCAGCAGGACCATTTCTCCATGAAAGTCTACAATCTCTCTCTTTATAGTAA
TCATATCTCCATTTGAATTGCTCGCCTTTGCCACTTGGTCCTTCAATTCCTTCAATCTAATGATGTATTCTTCCTCTTTCTCGACG
AAGAAAGAATTGAATTTCTCGAGCTCTTCCTCGAGAAGGCGAATGAAATCAAGTTCCTCCTTCGTTGGATCTGTGTCGCTGGAATT
TGGGTCGGATCTCGAACGCTTGTTTGGGCGATTGTCGCCGCCACCTATGGGCTCCAAGAGCTTCAGCTTCTTCTTGAGCTCCTTGT
AGGAGAGAAATTTGTCTTGCCATTCAGGCAAGGTTTCCTCTATCTGGTTGCTAAGACTCTTGCCGAATTTCATGGTACAAGGAGGC
TAACAAAACACACAAAAA
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GenBank top hits (Blast detail) | Score | e value |
XP_002878995 SPX domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1232 | 4e-133 |
NP_180234 SPX domain-containing protein 2 [Arabidopsis thaliana] | 1224 | 4e-132 |
XP_002524498 xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis] | 972 | 6e-103 |
XP_002285199 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 966 | 3e-102 |
ACJ85241 unknown [Medicago truncatula] | 927 | 1e-097 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q01317 Ankyrin repeat protein nuc-2 | 169 | 3e-011 |
Q55B06 SPX and EXS domain-containing protein 1 | 146 | 2e-008 |
Q9R031 Xenotropic and polytropic retrovirus receptor 1 homolog | 124 | 5e-006 |
Q9Z0U0 Xenotropic and polytropic retrovirus receptor 1 | 123 | 7e-006 |
Q9QZ71 Xenotropic and polytropic retrovirus receptor 1 | 123 | 7e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
O48781 Putative uncharacterized protein At2g26660 | 1225 | 2e-132 |
B9SES9 Xenotropic and polytropic murine leukemia virus receptor ids-4, putative | 972 | 4e-103 |
A5BFC3 Putative uncharacterized protein | 966 | 2e-102 |
B7FKF7 Putative uncharacterized protein | 927 | 7e-098 |
B9IMZ5 Predicted protein | 912 | 4e-096 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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