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Information for unigene UN09371
| FASTA Sequence |
| Unigene ID: UN09371 | Length: 973 |
| SNP | GGAAATCAAAAGACAGCAGCAGAGGAGAGAAACACAAACAAACATGGCGGTTCTCTGTTCGTCTTCAACAGTTATACTCCCTTCGG
TGAAAACCTCTGGTGGTAACAGAAGGTCTCCGTTTCTAGGCTTCTCCCTAACTGCTATCTCGAAACCGTCGGTGCGAGTCGGCATT
TACGCGAACACGAAGAGGGGATTGCAGGTGAAATGCGAAGCGGAGGAGCAGGGTACTACTGCTACTGCTACTTCCCTTGTTCCGGC
GAATCAACGGTGGATGTTCGACGAAGAAGAAGCTAATGGCCCTGACATTTGGAACACAACGTGGTATCCAAAGGCTTCGGACCATG
TGAACACGGACAAGCCTTGGTATGTTGTCGATGCAACCGACAAGATTCTCGGTAGATTGGCATCCACCATTGCTAATCACATCCGT
GGGAAGAACCTTGCCTCCTACACTCCCAGTGTCGACATGGGAGCCTTTGTGATTGTGGTGAATGCTGAGAAAGTTGCTGTGTCTGG
AAAGAAGAGGAACCAGAAGCTTTACAGGAGGCATTCGGGACGACCTGGTGGTATGACAGTGGAAACGTTTGATCAGTTGCAGCAGA
GGATCCCTGAAAGAATCATTGAGCATGCTGTTCGTGGAATGCTTCCAAAGGGACGGCTTGGGAGAGCGCTGTTCAATCACCTGAAG
GTGTACAAAGGCCCAGAGCATCCTCACGAGGCGCAGAAGCCGCTTGATCTGCCCATCAGGGACAAGAGAATACAGCTGCAGAAATA
GAAACACCAGGGAATATCTGTACTAAGCTACCATTATCGCCAAGGGCATTGAGGTTTTTCTTCTTGAGTTTCTCTAGTTTCATCAT
CTCAAAACCAGAGGAGAGTTTGCAGATTCTTGTTTCTATTACTTGCTTCTATCAACTCTATGCTTTTAAAGCTTTGTAATGTGAAA
TAATCTTTTATTCAGTTTTTTGCTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887748 EMB1473 [Arabidopsis lyrata subsp. lyrata] | 1172 | 3e-126 |
| NP_177984 50S ribosomal protein L13 [Arabidopsis thaliana] | 1159 | 1e-124 |
| XP_002532120 50S ribosomal protein L13, putative [Ricinus communis] | 894 | 5e-094 |
| ABK96526 unknown [Populus trichocarpa x Populus deltoides] | 868 | 5e-091 |
| XP_002316846 predicted protein [Populus trichocarpa] | 836 | 3e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SYL9 50S ribosomal protein L13, chloroplastic | 1159 | 4e-126 |
| P12629 50S ribosomal protein L13, chloroplastic | 819 | 1e-086 |
| Q3MF94 50S ribosomal protein L13 | 499 | 1e-049 |
| Q8DMK8 50S ribosomal protein L13 | 499 | 1e-049 |
| Q8YPK6 50S ribosomal protein L13 | 495 | 4e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T1K1 50S ribosomal protein L13, putative | 894 | 3e-094 |
| A9PJH3 Putative uncharacterized protein | 868 | 4e-091 |
| B9I1Q8 Predicted protein (Fragment) | 836 | 2e-087 |
| A2WV25 Putative uncharacterized protein | 807 | 4e-084 |
| Q94J17 Os01g0749200 protein | 807 | 4e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G78630.1 emb1473 (embryo defective 1473); structural constituent of ribosome | 1169 | 3e-128 |
| AT3G01790.1 ribosomal protein L13 family protein | 199 | 8e-016 |
| AT3G01790.2 ribosomal protein L13 family protein | 199 | 8e-016 |
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 116 | 3e-006 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 116 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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