Information for unigene UN09378
| FASTA Sequence |
| Unigene ID: UN09378 | Length: 1703 |
| SNP | AGGCAATCTATCTATGGAGAAAAAGAGCATGTTCATTGAACAAAGCTTCACTGATAACAAGAGTGGCGATATGAACAAAAACTTTG
ACGATGATGGACGCGAGAAAAGAACAGGGACTTGGATGACGGTGAGCGCCCATATCATAACAGCGGTGATAGGGTCAGGAGTGTTG
TCACTGGCGTGGGCAATTGCACAGCTCGGATGGGTGGCAGGACCCGCTGTGCTTATGGCTTTTTCCTTCATCACATACTTTACATC
AACCATGCTTGCCGACTGTTATCGTTCCCCAGATCCTGTCACCGGAAAACGAAACTATACCTACATGGAAGTTGTCCGCTCTTACT
TAGGAGGAAGAAAAGTGATGTTATGTGGATTGGCTCAATACGGGAATCTGATTGGAATAACAATCGGCTACACAATCACTGCGTCG
ATTAGCATGGTGGCAGTGAAGAGGTCGAATTGTTTCCACGAGAATGGACATAATGTGAAATGTTCCACTTCAAACACTCCCTTCAT
GATCATTTTCGCATGCATCCAAATTGTACTTAGCCAAATCCCAAATTTCCACGATCTCTCTTGGCTCTCCATTCTAGCGGCCGTAA
TGTCCTTTTCTTACGCCTCCATTGGTGTCGGTCTCTCCATCGCCAAAGTGGCCGGTGGCGGTGTGCACGCAAGGACGGCCCTGACA
GGAGTTACGGTCGGAGTTGATGTTACTGGTTCTGAGAAAGTTTGGAGAACATTCCAAGCGGTTGGAGATATCGCATTTGCTTATGC
CTACTCAACCGTACTTATTGAGATACAGGACACCTTAAAAGCAAGTCCACCATCAGAAAACAAAGCCATGAAAAGAGCAAGCCTTG
TGGGTGTATCCACAACGACCTTCTTTTACATGTTATGCGGGTGTGTGGGTTATGCAGCCTTTGGAAATAATGCGCCTGGAAATTTC
CTAACCGGTTTTGGTTTTTATGAGCCCTTCTGGCTAATCGACTTTGCCAATGTCTGCATCGCCGTGCATCTCGTTGGGGCCTATCA
GGTCTTTTGCCAGCCAATCTTTCAATTTGTAGAGAGCCAGAGTGCAAAACGTTGGCCAGATAACAAGTTTATTACTGGAGAGTACA
AAATGAACGTCCCTTGCGGTGGTGATTTCGGTATCAGTTTGTTCAGATTGGTTTGGAGGACTTCATATGTTGTAGTCACCGCGGTC
GTAGCAATGATCTTCCCTTTCTTCAACGATTTCTTGGGTCTTATTGGAGCAGCTTCCTTCTGGCCTTTGACTGTTTACTTTCCCAT
TGAGATGCATATTGCTCAGAAAAAGATGAAGAAATTTTCTTTCACTTGGACATGGCTGAAAATCTTGAGCTGGGCTTGTTTCCTCG
TCTCCCTCGTTGCTGCTGCTGGATCTGTGCAAGGACTCATACAAAGTCTTAAGGATTTCAAGCCTTTCCAAGCTCCCGAGTAGAAA
CTGTGTTTTGTCTAATGTCTTCAAGAACACAACTCCCTTGCACTCTCTTTTCTCCAATAACTGTGTATGTTCGTTTGTAATATATT
TGTGTTTTTGTTTCATTACGAAATGTTCAACCTATATTTGCTTGTTTGAAACAAATCTATCATCAATAAGTCCCTCTTTCTTTTCT
TTGTCCTTGGTACCTCAGTTTCTTTTTTTTTTTTTTATGAGAAGTATGATAATGTGATGAGATAGGCTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAD92450 amino acid permease 6 [Brassica napus] | 2501 | 5e-280 |
| NP_199774 amino acid permease 6 [Arabidopsis thaliana] | 2347 | 4e-262 |
| ACU21356 unknown [Glycine max] | 2011 | 3e-223 |
| ADB92670 amino acid permease 6 [Populus tremula x Populus alba] | 1977 | 3e-219 |
| XP_002510013 amino acid transporter, putative [Ricinus communis] | 1957 | 6e-217 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P92934 Amino acid permease 6 | 2347 | 2e-263 |
| Q42400 Amino acid permease 1 | 1890 | 2e-210 |
| O80592 Amino acid permease 8 | 1729 | 7e-192 |
| Q39134 Amino acid permease 3 | 1517 | 3e-167 |
| Q9FN04 Amino acid permease 4 | 1502 | 1e-165 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7Y076 Amino acid permease 6 | 2501 | 3e-280 |
| C6THQ4 Putative uncharacterized protein | 2011 | 2e-223 |
| D6BV79 Amino acid permease 6 (Fragment) | 1977 | 2e-219 |
| B9R6S0 Amino acid transporter, putative | 1957 | 4e-217 |
| P93561 Amino acid transporter | 1922 | 5e-213 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49630.1 AAP6 (AMINO ACID PERMEASE 6); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | 2347 | 1e-264 |
| AT1G58360.1 AAP1 (AMINO ACID PERMEASE 1); amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | 1890 | 1e-211 |
| AT1G10010.1 AAP8; amino acid transmembrane transporter | 1729 | 6e-193 |
| AT1G77380.1 AAP3; amino acid transmembrane transporter | 1517 | 2e-168 |
| AT5G63850.1 AAP4; acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter/ primary active transmembrane transporter | 1502 | 1e-166 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
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For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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