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Information for unigene UN09401
| FASTA Sequence |
| Unigene ID: UN09401 | Length: 1121 |
SSR | SNP | GCCCATAAATGAATATAATTACATAAAATTTGGTAAATTCGGGAAGGAGTATATATATATATTCATCATGTAATGGACATGAACAA
CATGGAAAAAACTCAATATAAGAAACAACTTGAGCAGTCTTAACACTTCAGAAGAAACTCTTGTAGAAAGATCACACGAATACAGA
CAGAAACAAGCACACACTGAGTCGGGTAAGAAACTTTAATAGATAATGGCAATAGAGAGTAGTGATGGGTCCCTTTCCTGTTCATC
TCATCACTTCAGTACATTGTACAAGTATGCAGCGATACCCAGAACGATACACAACAGAACAATATCGATGCAGAAGTTCCTGCTTG
ATCTCAGCTGGTTCACAGTATCTTTGAGTCTAACATTGGTGTTCTTAAGATCCGAGGTTGCTCTGTCCACCTTTGAGTCGATTTCA
TCCATCAGAGGAACTTGCCGATCCAGCTCCTCGTTCATATCAGACGCCATGTTCTTCAAAGCATCTAGACCTTCGGAGATCATGTC
CAGACCTTGGTCCTGCTTAATTTTGCGCATCTCAAACTCCTGTTTGAACTGGCTGGATTCATGCGACTCTTGAAAGTAATCATCAT
CAAAACGCCCATCTGAATCAAACTTGATATCAGGACGAGAGGTTGTAGAAGGAGCCCAAGCACTAGTAGTGCTTTTAGGACCACCC
GCTGTCCCATCAGGTATAGCTTCGATCCTCGCCGGAAGCGCAAGCACCAAATCGTTTCTCGCAGCAAGCTCTTCCGTTGTAAGGCC
CTTTACCCGCTTGAGAGCAAGTCTCTGCAGCTTGGGAACTTCCTCAGACAATCTAGCCTTTGTGCGACGGATCTCAGCGTTCATCG
CAACAGCGGAAGCTCTGTTCTTCTCCTTGGTAACAATCTCAGCTTTCTCGAGAGCTGTCTCGATTTGGGTCTCGAAAGCTCCGTAG
AGACGAGCGAAAGCGCCATCGCCGGAGATGTTGGACTCGCGCTGTTTGTCGACGTCGTACTTGTCGTACTTCTTGCAGATCGTGTC
AACTCTGGTCAGAATGTCGATCACTGTCATCTTCTCTCACAAAGGAACTTCCGGATCTCTAATTAAGGGATAGAATCTCTCTGATT
CCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566354 syntaxin-71 [Arabidopsis thaliana] | 1258 | 4e-136 |
| XP_002882636 hypothetical protein ARALYDRAFT_897138 [Arabidopsis lyrata subsp. lyrata] | 1258 | 4e-136 |
| XP_002280272 PREDICTED: hypothetical protein [Vitis vinifera] | 1069 | 3e-114 |
| XP_002519551 syntaxin, putative [Ricinus communis] | 1062 | 2e-113 |
| XP_002322868 predicted protein [Populus trichocarpa] | 1036 | 2e-110 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIU8 At3g09740 | 1258 | 3e-136 |
| B9S0N2 Syntaxin, putative | 1062 | 1e-113 |
| B9IJ24 Predicted protein | 1036 | 1e-110 |
| C0L7E7 Syntaxin-71 | 1015 | 4e-108 |
| C6TKX1 Putative uncharacterized protein | 1013 | 7e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 1259 | 1e-138 |
| AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter | 882 | 6e-095 |
| AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter | 850 | 3e-091 |
| AT5G61210.1 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein binding | 119 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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