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Information for unigene UN09420

FASTA Sequence
Unigene ID: UN09420Length: 715 SSR 
GGAACTCTCTCTTCCTGTCTCTGCATTCGATTCGTGAGAAGCAAAGAAAGAGAGAGAGAGAGAGCTTCAATGGAGTTAGCTTCCTT
CGTCGGTAGAGCTCTGTTCGTTTCCGTATTCCTTCTCTCCGCATGGCAAGAGTTCAATGGGTTTGGCGATGACGGGGGTCGAGCAG
CTAAATCCTTAAAACCAAAGTACAATGCTTTTGTTAGCCACGTGACAACTCATACCGGCCAGCAATTGCCACCAGTTGATATGAAG
ATTCTTGTTGCTGCTGCTATAGCCTTGAAAGGCATTGGTGGACTTTTGTTCCTCTTTGGCAGCTCTCTGGGAGCTTATCTCTTGCT
TCTGCATCAAGCCGTTGCCACCCCGATTCTGTGTGATTTCTACAACTACGATGTTGACAAAAAGGAATTCAGCCAACTGTTTTCCA
AGTTTACTCAGAGTTTGGCACTCCTTGGGGCACTGCTCTTCTTCATTGGAATGAAGAATTCGAGGAGACATGGTAGGCAACTCCGG
AAGAAGGCTCCAAAAGCTAAAGCAAACTGATAAAAAATGATGTTTTTCATCGGGTTGTTCAAGCTTTTGTCTGTATTTTTATTTTT
ATTTTGGAAACCATGAGGAGAGGCAAAATTTTTGCTTATTTCCTTGAAGCTTATTGACACTTTTTGTAGAGACTTTTTGGTTCTCT
AGAGAAATACCTTTTCAATTTCGGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868284 hypothetical protein ARALYDRAFT_915427 [Arabidopsis lyrata subsp. lyrata]7545e-078
NP_193178 HR-like lesion-inducing protein-like protein [Arabidopsis thaliana]7501e-077
XP_002529307 conserved hypothetical protein [Ricinus communis]5833e-058
AAC49975 ORF; able to induce HR-like lesions [Nicotiana tabacum]5556e-055
XP_002284580 PREDICTED: hypothetical protein [Vitis vinifera]5521e-054

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O23298 AT4g14420/dl3250c7501e-077
B9STI8 Putative uncharacterized protein5832e-058
P93384 Nicotiana tabacum ORF5554e-055
B9H8K2 Predicted protein5232e-051
A9PE25 Putative uncharacterized protein5205e-051

Arabidopsis top hits (Blast detail)Scoree value
AT4G14420.1 lesion inducing protein-related7515e-080
AT1G04340.1 lesion inducing protein-related4201e-041
AT5G43460.1 lesion inducing protein-related3993e-039
AT3G23190.1 lesion inducing protein-related1592e-011
AT3G23180.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: lesion inducing protein-related (TAIR:AT3G23190.1); Has 68 Blast hits to 68 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1467e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  17%
 
75  83%

Unigene MembersMember information