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Information for unigene UN09422

FASTA Sequence
Unigene ID: UN09422Length: 630  SNP
GGCCGTCTCCTCAGCTAAAAGACGCCGCTCGTCTATTCAGACAGTCTCACCTTCTAGGATTTGTTCAAGAGAGAAGGGGGTTGAAA
GATGAGTCGTGGAAGTGCAGCAGTCGCCAAGGGAAAGAAGAAGGGAGTCTCCTTCTCCATCGACTGCTCCAAGCCTGTCGATGACA
AGATCATGGAGATTGCTTCCCTCGAGAAGTTCCTTCAGGAGAGGATCAAAGTCGGTGGCAAAGCCGGTGCGCTCGGTGACTCTGTC
ACAATCACCCGTGAGAAGAACAAGATCACTGTCACTTCTGATGGCCAGTTCTCCAAGAGGTATCTCAAGTACTTGACGAAGAAGTA
CTTGAAGAAGCACAATGTGAGGGATTGGCTCAGAGTGATTGCAGCCAACAAGGACCGTAACCTCTACGAGTTGAGGTACTTCAACA
TCGCTGAGAACGAGGGTGAGGAAGAAGACTAGAAGAACTACACTACTGTTTCTGTTGTTTTGGTTTCTGCTCGTTGCTGCTCAGTA
CAATTTATCTTGGTCCTTCTATTGTTTTTTGTCAGATCTTGTTTAGTTTGGTTGAACTTAAACTCTTGTTTCAGACACTTTTGTTT
GAGAAAAAAATTAAAGATCTTTATGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34418 unnamed protein product [Thellungiella halophila]6173e-062
XP_002882425 60S ribosomal protein L22-2 [Arabidopsis lyrata subsp. lyrata]6155e-062
NP_187207 60S ribosomal protein L22-2 [Arabidopsis thaliana]6146e-062
NP_198129 60S ribosomal protein L22-3 [Arabidopsis thaliana]6012e-060
XP_002874346 60S ribosomal protein L22 [Arabidopsis lyrata subsp. lyrata]5941e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9M9W1 60S ribosomal protein L22-26143e-063
Q9FE58 60S ribosomal protein L22-36011e-061
Q9SRX7 Putative 60S ribosomal protein L22-14272e-041
P47198 60S ribosomal protein L223671e-034
Q4R5I3 60S ribosomal protein L223662e-034

TrEMBL top hits (Blast detail)Scoree value
Q0WRH6 60S ribosomal protein L22-like6011e-060
A5CBL0 Putative uncharacterized protein5714e-057
A9PCU0 Putative uncharacterized protein5616e-056
A9PD16 Putative uncharacterized protein5608e-056
C6SVM3 Putative uncharacterized protein5608e-056

Arabidopsis top hits (Blast detail)Scoree value
AT3G05560.1 60S ribosomal protein L22-2 (RPL22B)6152e-064
AT3G05560.2 60S ribosomal protein L22-2 (RPL22B)6152e-064
AT3G05560.3 60S ribosomal protein L22-2 (RPL22B)6152e-064
AT5G27770.1 60S ribosomal protein L22 (RPL22C)6028e-063
AT1G02830.1 60S ribosomal protein L22 (RPL22A)4271e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
812  29%
 
125  12%
 
611  26%
 
105  12%
 
99  21%

Unigene MembersMember information