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Information for unigene UN09434
| FASTA Sequence |
| Unigene ID: UN09434 | Length: 1370 |
| SNP | GGGCCTTACGAACCATTCACAGGCACTCACATAAGACCTTCTCTTCAGTTTGCTCAGAGAGTGAACCAACAAGCATGGCGAAGATG
ATGATGATGCAACAGAGCCAGCCTTCTTTATCTCTCCTTACTTCTTCTCTCTCTGACTTTAATGGCGCCAAGCTCAACCTACAAGT
CCAGTACAAGAGGAAAGTTCAACAGCCAAAAGGAGCACTCTATGTATCAGCATCGAGCGAGAAGAAGATTCTTATAATGGGTGGCA
CTCGGTTCATTGGTATCTTCTTATCCAGGCTCCTTGTTAAAGAGGGACATCAGGTTACATTGTTCACAAGAGGTAAATCTCCTATT
GCCAAACAATTGCCTGGCGAATCTGGCCAAGACTTTGCTGATTTTTCTTCCAAGATTTTTCACTTGAAAGGAGACAGAAAGGACTA
TGACTTTGTGAAGTCAAGTCTTTCTAGTCTTTCAGCTGAAGGCTTCGATGTTGTTTATGATATCAACGGGAGGGAAGCTGAAGAAG
TTGAGCCCATATTAGATGCACTCCTAAACTAGAACAGTACATCTACTGTTCTTCAGCTGGTGTTTACCTGAAATCTGATATCTTGC
CACACTGTGAGGTGGATGCAGTTGACCCGAAGAGCAGGCACAAGGGGAAGCTGGAGACAGAGAGCTTACTGCAATCAAAAGGTGTA
AACTGGACTTCTATACGTCCTGTCTACATCTACGGTCCATTGAACTACAACCCCGTAGAAGAATGGTTCTTCCACCGTCTCAAAGC
TGGTCGACCTATCCCAGTTCCAAACTCTGGGATCCAGATCTCACAACTCGGTCACGTTAAGGACTTGGCAACAGCCTTTCTCGCCG
TGCTTGGTAACGAGAAAGCAAGCAGAGAGATATTCAACATCTCAGGAGAGAAGTACGTCACCTTTGATGGCTTAGCAAGAGCTTGC
GCAAAGGCTGGTGGGTTTCCAGAGCCAGAGATTGTTCACTACAACCCTAAAGAGTTCGACTTTGGGAAGAAGAAGGCCTTCCCTTT
CCGTGACCAGCATTTCTTTGCCTCGGTGGAGAAAGCAAAGCATGTCTTGGGATGGACACCGGAGTTCGACTTGGTGGATGGTCTCA
CTGACTCATACAACCTCGACTTCGGTCGTGGAACTTTCAGAAAAGAGGCGGATTTCACTACTGACGACATGATTCTAAGCAAGAAA
CTTGTTCTTCAATAGAAACATTCTTGGCTTGTATATGGTTGTGTGATCTCAAACTGAAGAAGATTCTCAAGTTTAACGTCGTCTCA
AATGTATTTTCTGTATGGATTGTGTTCGAGTTTTTTCTATAAAAAAAAGCGGCGCGCGGTCTGGCTCTTGAAATTTTACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33886 unnamed protein product [Thellungiella halophila] | 1197 | 6e-129 |
| CAA75602 putative RNA binding protein [Arabidopsis thaliana] | 1183 | 3e-127 |
| NP_172405 RNA binding protein [Arabidopsis thaliana] | 1183 | 3e-127 |
| AAM65150 putative RNA-binding protein [Arabidopsis thaliana] | 1180 | 6e-127 |
| AAL32648 g5bf protein [Arabidopsis thaliana] | 1179 | 8e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SA52 Uncharacterized protein At1g09340, chloroplastic | 1183 | 1e-128 |
| Q9LYA9 Uncharacterized protein At3g63140, chloroplastic | 401 | 5e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RFM2 NAD dependent epimerase/dehydratase, putative | 1121 | 3e-120 |
| A9PJN1 Putative uncharacterized protein | 1098 | 1e-117 |
| A9PGZ8 Putative uncharacterized protein | 1096 | 2e-117 |
| B9I6P3 Predicted protein | 1096 | 2e-117 |
| A5AIE0 Putative uncharacterized protein | 1094 | 4e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09340.1 CRB (CHLOROPLAST RNA BINDING); binding / catalytic/ coenzyme binding | 1184 | 7e-130 |
| AT3G63140.1 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding | 401 | 5e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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