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Information for unigene UN09466
| FASTA Sequence |
| Unigene ID: UN09466 | Length: 1805 |
| SNP | AATGAAAGTAAATTTGTCGAAAACGTAATTATTATGGCCACTCGTTATTATTTTCTTTATTGTTTTATTCAAAATAATTGTCACCC
CATGCATATTCTTCCTATTTCCGTTTACAAGTAGATACGGAAAGGTTTCTTCAGTAACATATTGCAATACTATTTAACAAATCCAC
AATCGCAAAGATTTGTGCACCATCTATATATCGTGGTTTTCATCAATGTTTAGACAACGGTTGTAGCCATATAGCTTTTGCGATAT
GCCGCTGCATTTGTTGGAGACAACATTTGACCTATTCCTTCAGCCTTGAGATGAGGAACCAACAATTCCAAAGACAAACCAAAAAG
TCTGAGGCTATGCCAAACACGAAGAGGAGTTGGGAACGGAGAGAGCAGTTGGCCGATGGAGGATAAAGTAATAACGGATAGATGAT
AGATGAGAGAAAGTGGCCTAGGGTTCATGCCACCAAACACAGCCATCAAGCCTGACGTGCGAAACCCACCACTAGATAGGTAATCA
AAGCAGCCTTGTCGCATCGCTTCTTTTGCTTCGTCCGTTGATGCAATTAGCACTTGCCAAAATGAATTCCCTAATGTGTTTACTGT
TGCTGACATTGGCTTGCGTAGAACATAGAAGGACTTCATAACTTCTGAGACTTTGTTTTCATCACCGAGGCTGTCCAAAGGCTTGA
GAAGACGGCTTAGAATGAGAATGTCAGATAATAAAACCATCATCCCTGATGCAATTACTGGATGACGCATGTTGAATGCATCTCCC
AACACAATCACTCCCTTTTTTCTGCTTAAAGTAGCTGGCATGCGTTTTGCTTGTGTAATTTTTATATGTGATCCCTCATCGAGCCC
TTTCAAAAATGTTTTGCGGAATTTTAGAGGTACCTGGGGAGCAATAGAGTTCTTCACGAAGGACGCCATTTCACCATTAGAAACAG
ACGGAAGATTATTTGAGAGAAGCTCAAAATTACAACGAACGTCGGTGCTGCTGACTTGATACAACATGGCGAAGGACGGTTTAGCC
ATTATCAAGTGTAACTTGTCGGGCTGTTCAAGGCGACAATTCCTCGAGATGTAACCAATTTCGTACGCCGTAACCTCCGCATTGTT
GTCATTTAGAGAGCGACGAAGGTTCGAGTGGCAACCATCGCATACCACAGTGAGAGGTGCAAATGCTGTGGTTTCTTCCCCTGAAC
TGTTCTTGTATGTCACTCCTTTGACCACTCCTTTTTCTTCTATCAAAGATCTCACGGTCCCTTCTTCCAGCCGCACATTTGGAAGA
GAAGAGGCCTTTTGGCGCAGTCTCTGGACAAAACGGCCATTTTGAAAAAAACGACCAGATGGTTCATAAGGAAAGTTGGTGTCCAC
CGGATAAGATGCGACTGTTTCTTTTCCGTCCTTAAAAAGAGCTATGCCGGTGGATTTCTGTGCGTCTATTCCCTCTAAACAATCCT
GAAGACCGAGCTTAGAAAGCAAGAGCCGTCCTCCTGGCTGCATGAACTCACCCATCATTCTCACTGGCTCTCTCATGTCTCTTTCT
ATCACATGTACTCGACGCCCGTCCTTGGCAAGTGCATAGGCGAGAGCTGAGCCACCCACACCAGCTCCGACTATGATGACATCAGG
GCCACCGTCTCTTCTCTCCTTCGCTGCCACATTCGCACACTTCGTCGCCTTATTCATCTTGTTGGTGACGTGGAATATTGTCCAAG
ATATTACGAAGGCAAGTAGCATCCACAAACAAACTTCCACAAAAGCCATATTCATAATCTATTTATTACTCTGTATGAGAGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O65726 RecName: Full=Squalene monooxygenase 1,2; AltName: Full=Squalene epoxidase 1,2; Short=SE 1,2 | 2437 | 1e-272 |
| NP_197803 Squalene monooxygenase 1,1 [Arabidopsis thaliana] | 2135 | 2e-237 |
| CAA06772 squalene epoxidase homologue [Arabidopsis thaliana] | 2126 | 2e-236 |
| XP_002874173 hypothetical protein ARALYDRAFT_910438 [Arabidopsis lyrata subsp. lyrata] | 2112 | 7e-235 |
| XP_002874172 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2099 | 2e-233 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65726 Squalene monooxygenase 1,2 | 2437 | 6e-274 |
| O65404 Squalene monooxygenase 1,1 | 2135 | 6e-239 |
| O65402 Squalene monooxygenase 1,2 | 2070 | 2e-231 |
| O65727 Squalene monooxygenase 1,1 | 1954 | 6e-218 |
| O65403 Squalene monooxygenase 2 | 1668 | 9e-185 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFB1 AT5G24150 protein | 2135 | 1e-237 |
| Q2V349 Putative uncharacterized protein At5g24150.2 | 1995 | 2e-221 |
| B6U6N2 Squalene monooxygenase | 1252 | 3e-135 |
| A9NW92 Putative uncharacterized protein | 1249 | 6e-135 |
| B4G0B2 Putative uncharacterized protein | 1249 | 6e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G24150.1 SQP1; squalene monooxygenase | 2136 | 4e-240 |
| AT5G24160.1 SQE6 (SQUALENE MONOXYGENASE 6); FAD binding / oxidoreductase/ squalene monooxygenase | 2071 | 1e-232 |
| AT5G24150.2 SQP1; squalene monooxygenase | 1995 | 9e-224 |
| AT5G24140.1 SQP2; FAD binding / oxidoreductase/ squalene monooxygenase | 1669 | 6e-186 |
| AT4G37760.1 SQE3 (squalene epoxidase 3); squalene monooxygenase | 1196 | 4e-131 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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