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Information for unigene UN09477

FASTA Sequence
Unigene ID: UN09477Length: 1070  SNP
GTAAAAAAGGAAGACACTTTTTATTATTTTTTTCTGAAAATAACCAAAAGTACATGACTAAAGAACCTAAAATAAGAAATAAAGCC
CTAATGGAAGAGGGACCCAAATAAGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGTAGGGGAAGGAAGTAGCGATCGTCGT
AAAAGCCCAAAATGACATCAGAACACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGAAATCTCCCTGTG
TAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGACGGCCCAAATTCGGCCATGCAGTTAATGAAATGCCCCCACGGATTCCA
ATTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGGAGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTG
GAGAGGGAATGATCAGAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGATGGGTTAGGAGGTGGAGGAGAC
TTTTTTAGAGCTGGACGCGGAGGTGATGGTGTAGGTGATGGCGGAGACTTTTTAGGAGTCGGTGGAGGGGATGGTTTATAAGGCGG
AGGAGACTTTTTTGGAGCTGGAGGCGGAGGTGAGGGTTTAGGAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAG
GTGGAGGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGGAGCCGTCTTAGGAGCCGGGGGAGATGACGGA
GTTGTTGGCTTTCGTGAGGGTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCGTTGTTATGGGTACATTT
CCATACTTTGGAATCTCCGAAATTGAATTTACCAGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCATTAG
AGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGAACAATGACATAGAGGAGAGCTACGACGACGATAATGAGG
CTTTTCATTGTTGACTGTGTGCGAAATGAATTGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001077677 ECA1 gametogenesis related family protein [Arabidopsis thaliana]7055e-072
ABA41400 pherophorin-C2 protein precursor [Chlamydomonas reinhardtii]4242e-039
ABA41399 pherophorin-C1 protein precursor [Chlamydomonas reinhardtii]4116e-038
CAD22154 pherophorin-dz1 protein [Volvox carteri f. nagariensis]4044e-037
YP_293958 hypothetical protein EhV204 [Emiliania huxleyi virus 86]3982e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9T0K5 Leucine-rich repeat extensin-like protein 33862e-036
Q9FPQ6 Vegetative cell wall protein gp13593e-033
Q9LJ64 Pollen-specific leucine-rich repeat extensin-like protein 13306e-030
P13983 Extensin3243e-029

TrEMBL top hits (Blast detail)Scoree value
A8MQW1 Uncharacterized protein At1g44191.17053e-072
Q3HTK5 Pherophorin-C2 protein4241e-039
Q3HTK6 Pherophorin-C1 protein4114e-038
Q8L685 Pherophorin-dz1 protein4043e-037
Q4A2S9 Putative membrane protein3981e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein7473e-079
AT4G13340.1 leucine-rich repeat family protein / extensin family protein3862e-037
AT3G19020.1 leucine-rich repeat family protein / extensin family protein3306e-031
AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related3234e-030
AT4G15160.1 lipid binding / structural constituent of cell wall3038e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  33%
 
95  28%
 
83  17%
 
114  22%

Unigene MembersMember information