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Information for unigene UN09486
| FASTA Sequence |
| Unigene ID: UN09486 | Length: 1085 |
SSR | SNP | CATGTCTTTTACTGGATAGGAACTAATAGTATATTTAATCGCGTGAATATCTTCTAAAAAAATCAAGAATGTGCCAAAAAAAAATC
AAGACTTTAATTTTGATTTGCAGAGTAAACAATACACCTATAGATTTTATGGCCAGTTTAGCTATAATTTTAATTTTTGGTTAATG
CAATAGTTTAAGATGGCTTTGAGTAATACGAGTGGCTACATATTCTTCTGGTGTGATTCAATTGAACATAACCTGCCGATAATATA
TCAAGAAGTATTCGTCTGTTACACAAAATATAACATCGGGATACAGAAAATATCAAGATGTACGTATCTAATGTATATGTATAGCA
ACAATATATAAGCATCAAGAGGTACTCACAAAGGGAAACAAAACAATATAATATATATAAAAGAAAAGTACAAACAATTTAGGACT
CACACTGACCATTGACCAATGGAATCAGTGTTGTCATGCTGCTGCTGCTGCGGGAACTGTTTCTGCAATGATTTAGGTGAGAAAGG
GAGATTTGGAAAAGGTTGATGATCAGCGGGAAAGAACGGAGAAGGATGATGATGAGAGATGTAACTAGTACATGACATGTTGTTAT
GGTCCTGTTCTTGGAACTGGAAATGATTATTCTGTTGTACTTGTTGTTGTCTCTGTTTTGGGCTATTGGCTTTCTCTCCTTCGGTT
TCTCGGTATTTGTTGAGATAGACCTTTAACGGAGCCACGTAGTCTTCGAAACCGAGAGTTGTAATGGCCCAAATTATGTCATCTCC
ATTGATGGTTTTCCTCTTCTCTCTTTGACACTTATCAGAAGCTTCACCAGTAACGAAACTGATGAACTCTGATACACATTCTTGAA
CGGTTTCTTTGGCGTCTTTCGAGATCTTACCATTACCGGGAAGAACCTTTTTCATAATTCTTCCGACATTGGCAATTGGAAGAAAC
CGGTCTTGTTCTTTGTTGTTGCTGTTGTTATTGTTCTTTGAAGAAGGGCTTCCAAGATTTGTTTCGGCTACTCCAGGAGATTCATG
ATCCTCCTCTGGGCTTTCTTCAGTCATATCTCTATCTTTCTTTATTTTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178981 nuclear transcription factor Y subunit B-7 [Arabidopsis thaliana] | 928 | 7e-098 |
| ABK28488 unknown [Arabidopsis thaliana] | 928 | 7e-098 |
| XP_002885881 hypothetical protein ARALYDRAFT_899587 [Arabidopsis lyrata subsp. lyrata] | 646 | 3e-065 |
| CAN71881 hypothetical protein VITISV_035430 [Vitis vinifera] | 588 | 2e-058 |
| XP_002516312 ccaat-binding transcription factor subunit A, putative [Ricinus communis] | 582 | 9e-058 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SIT9 Nuclear transcription factor Y subunit B-7 | 928 | 3e-099 |
| O23310 Nuclear transcription factor Y subunit B-3 | 470 | 4e-046 |
| Q9FGJ3 Nuclear transcription factor Y subunit B-2 | 445 | 3e-043 |
| P25209 Nuclear transcription factor Y subunit B | 435 | 4e-042 |
| Q60EQ4 Nuclear transcription factor Y subunit B-3 | 431 | 1e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEK8 Putative uncharacterized protein (Fragment) | 928 | 5e-098 |
| C0SV44 Putative uncharacterized protein At2g13570 (Fragment) | 928 | 5e-098 |
| A5B0K3 Putative uncharacterized protein | 588 | 1e-058 |
| B9RRE3 Ccaat-binding transcription factor subunit A, putative | 582 | 6e-058 |
| A9NR95 Putative uncharacterized protein | 488 | 5e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G13570.1 NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7); transcription factor | 928 | 3e-100 |
| AT4G14540.1 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | 470 | 3e-047 |
| AT5G47640.1 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2); transcription factor | 445 | 3e-044 |
| AT2G37060.1 NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | 429 | 2e-042 |
| AT2G37060.2 NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | 429 | 2e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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