RadishBase

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Information for unigene UN09504

FASTA Sequence

Unigene ID:UN09504

Length: 819

GGGGAGTTAACGTAAACAAAATGGAATACGGTAAAATAAATAAACTAAAAAAACCAGAAGTAGGACTTTTCGCCGAAGAAGAAGAG
AGATTCCCTCTCTACCTACGTCGATAAATCTACGAGGGAGCTTGACCTTGAGAACAAGAGAAAGATGGGTTTCTTCTCGTTTCTTG
GAAGAGTTCTCTTCGCTTCTCTCTTCATCCTCTCCGCATGGCAAATGTTCAATGACTTTGGAGTTGATGGTGGTCCTGCAGCTAAA
GAGTTGGCTCCAAAGCTTCATCTAGCCAAGTCACATCTATCTTCTAGATTAGGTGTAACTTTGCCTAGCGTAGAGGCAAAACAAGT
CGTTGTTGCTATAGTTGCGTTGAAAGGAGTTGGAGGCTTACTCTTTGTTATCGGAAACATCTTCGGTGCTTATCTTCTGGCTTTCT
ACTTGGTGGTTGTCAGTCCTATTCTGTTTGATTTCTACAACTACGGACCTGAGGAGCGTCATTTCTCTCCATTGTTGACCGAGTTC
TTGCAGAGCGTTGCACTCTTTGGAGCATTACTCTTCTTTATTGGAATGAAGAACTCAACACCCACTAAGAGGAATCTGAAGAGGAC
TCCTAAGCCGAAAGCTGCTTAGTATCTTCTGGATTGCCACACTTAATACCTTTCAGTTTTGTTTTTGTTTTGTTCGGACAAATTCG
TTTCTTAGCACTTTTGGTTTTCTTTTTGCTGTATTATTCTTAGATTGGCTCATGATATCATATTATTATCTTTTCCTTCATTTGAT
ATTGGGAATTCTTGGACTTTTGATTTGCTAAAACTTGAACCATGC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
ACG24094 nicotiana lesion-inducing like [Zea mays]	778	1e-080
NP_001147050 nicotiana lesion-inducing like [Zea mays]	751	1e-077
NP_171929 HR-like lesion-inducing protein-like protein [Arabidopsis thaliana]	665	1e-067
AAM64747 Nicotiana lesion-inducing like [Arabidopsis thaliana]	662	3e-067
XP_002862554 hypothetical protein ARALYDRAFT_497403 [Arabidopsis lyrata subsp. lyrata]	662	3e-067

Swiss-Prot top hits	Score	E value
No hits found

TrEMBL top hits (Blast detail)	Score	E value
B6SGW1 Nicotiana lesion-inducing like	778	7e-081
B6SK94 Nicotiana lesion-inducing like	751	1e-077
O22690 At1g04340/F19P19_23	665	9e-068
Q8LBI4 Nicotiana lesion-inducing like	662	2e-067
Q9LSW5 AT5g43460/MWF20_18	640	7e-065

Arabidopsis top hits (Blast detail)	Score	E value
AT1G04340.1 lesion inducing protein-related	666	4e-070
AT5G43460.1 lesion inducing protein-related	664	7e-070
AT4G14420.1 lesion inducing protein-related	427	2e-042
AT3G23190.1 lesion inducing protein-related	139	6e-009

EST library breakdown for ESTs in the assembly


9	8			24%


11	2			6%


10	4			12%


6	3			9%


8	12			36%


12	3			9%


20	1			3%

Unigene Members