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Information for unigene UN09509
| FASTA Sequence |
| Unigene ID: UN09509 | Length: 1832 |
SSR | | GCACCAGCGGAGAGAGAAGCCATGTATTTAATCCCGAGGCTTCGAGATCTAGCCTTTTCTGTTGACATAAGGCCATCATGCTTGGA
AGAAGGAGCGACCTCTGGTGCACTATCAGAGCAACTTTGGCTAAGGGCAACTTCTTCTGGCGCCTTCACAGTTTTTGAGAAGAGAG
CTTTTGGGATTGCAGATGACATGTATTGTGTAGTTCATTTTCTAAGCTGCGTGTGTTACTTGATAAAGATATAACACATTTTATTG
TTTACAGATATGAAGCCGGTCTTCTCTTTGCATACTTGGCCTTTGTTCCGTTTTGTGAAGCAGGCGTAATGGATTCTCCTTCTCTT
CAGGCAAGATTACCATATGACTTGATGCCATGCGAATGTTTTGAACAGCTTTGTTTTTGCTCCTTTAAATATAAGCTCGCATCTTT
TGGCGTCTAACATATCTCCGGATAGTGTTTGGTTAACCGTCAGCTTAATCTGATGAACTGCAGAGACTACTGGAAAACACATTCCG
GCTGGATGTAGAGGCTGTTAGAGAGTACTGTTTAGCTGATGAACGCCTGGAAGAAGCTGTTAAGTTTCTGGATTTTGGTGATAGAG
CTGGTTGGGAATTACTCCAGGCAATGATGAACGCTGACCACAGGAAACGGCCAATGGCGGAAGCTGTTCTTAGTCACCGATTCTTG
AACGGTGTTGTTAATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAGAGAGAAT
GGAGGAGATGATGAAAACGACCAAGGCAGAGGAGGAGACGACGAAAACGACCAAGGCAGAGGAGGAGTTGGTGCAGGCGAAGATGC
ACCGTGAGATTACGAAGCTCGATGATGAGAAGCTTTGGGCAGAGTTTGAACCGTTGGAAATCGATAAGATCGAGAGTGGTGAAATC
AAACCCAAGACCTTGATCACCAATCGTGGTCGGTTCCACTCTCCGCTATTTCGTAAGAGGGAACCTATAATTGTAAAGGAGATGCT
CTCAGTGTTCCCTAATTCTACTTACATTAAGTGGAAGAGAAGGTGGAATCCCGACTCGGTAAAAGACCTGATGGTAATAGCAAAAG
AGAGAGAGTGTACGTCTCTCGTTCTCGTCGATGCAAACCCTTTGGGACATGATGAAATATGTATTGTAAGCTTGTTGAATGGTGCT
GCCGCTTATTTCAGGGTTTGTAATCACATCCCGCGTGAGGATATACCGGATCAAGCAAACGCCCCGAAATGCCTCCTCGATCCTTA
TGTTCATATGGCACTTTTTACATCTCAGGCCGGTCTTGGCCTTAGCAGATTGATACAATCACTCTTCCCCAAGGCCCCCACTAATT
CCAGAACCAACAAACCCTGTCGAAAGAACGCTGCACTTTTCCAGTACAAAGATGGTTTTGTCTTTTACCGACATCATTGGCTCCAC
TTTGAGAAAGCAGCCGTTTCAGAAGAAAGGCCAAAGCTCACCTGGAAGGAAGTTGGACCTCGTTTCCAACTCTTGTTTTTAGGTGT
GAAGAAGGTATCACTTGTCACGGGGAATTTCAAACTTATTTGCATGCCTCGCCCCTCTCACTATTGCTGCCCACAACGTCACCTTA
TGATTCCGCCTATTTAGGTGCTCTTTCCATGTTTTTATTTTTTCTGTGCAACAAAAACAAAACTTATGTGTTTATTATCTATGTTT
GCTGTAGTATTTTAACATGGTTTTTTGCCTTGGGGTCATTTATATTGGCCCTTTTTGTTACAATTTAAAAATGAGAAGAAAATAAG
AGGTGATCTTGTTTTTTTTTCAAGGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893265 predicted protein [Arabidopsis lyrata subsp. lyrata] | 674 | 4e-068 |
| XP_002880992 hypothetical protein ARALYDRAFT_901791 [Arabidopsis lyrata subsp. lyrata] | 468 | 3e-044 |
| XP_002873795 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 354 | 5e-031 |
| NP_197183 protein kinase family protein [Arabidopsis thaliana] | 348 | 3e-030 |
| XP_002325386 predicted protein [Populus trichocarpa] | 303 | 4e-025 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49756 RNA-binding protein 25 | 139 | 2e-007 |
| B2RY56 RNA-binding protein 25 | 137 | 3e-007 |
| Q86AH4 Putative uncharacterized protein DDB_G0271982 | 137 | 3e-007 |
| Q5T200 Zinc finger CCCH domain-containing protein 13 | 132 | 1e-006 |
| Q14687 Genetic suppressor element 1 | 127 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWD0 Putative uncharacterized protein At5g16810 | 348 | 2e-030 |
| B9IPK1 Predicted protein (Fragment) | 303 | 3e-025 |
| B9S235 ATP binding protein, putative | 301 | 5e-025 |
| A2X8J4 Putative uncharacterized protein | 290 | 9e-024 |
| A3AAC2 Putative uncharacterized protein | 290 | 9e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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