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Information for unigene UN09542

FASTA Sequence
Unigene ID: UN09542Length: 812  SNP
TTTTTTTTCCGAACCATATTGTACTATATATTGTCAATTCAATACACGTACATTTCAAGGGAAACTCACTTGCTTTCAGCCTCTTT
GTAAATTAGCAAAGGGAAAATGATCATAAACAAAGACTAAACATAACGAGAGGACAAAGACAGATTCACATATGATTTTCAGCAAT
CGGGATTGGTTTCCTCATCATCAATCGCAGCAGATGCAAGCACAAGCTGAGGGGTAGGAAGTGTGTAAGTGTAGTTCTCGCGTCTG
GCCTTCTTCTTCTCCCTTTGCACTCTAAAAGCTTCCCTCTTTCTTGCTCTGTAACTGTTGGGATTCTCTGGCACAACTTCTCTAGG
GTACACACTAATCTTCTTCCTGTCAGGACCAAACTTCTCGAACTTGACAAGTCCATCGATTAAAGAGAAGATGGTATGATCTTTAC
CAATCCCAACGTTCTTTCCAGCATGGAACTTAGTGCCACGTTGACGAACGATGATGGCCCCTGGTTTAGCGACTTGGTCACCGTAA
ATCTTGACGCCGAGTCTTTGTCCCGGAGAATCACGACCGTTCTTAGTACTCCCAGCTCCTTTCTTGTGCGCGGATTCAATCGTCAA
TGGAATCGGAGCTTGGAGTTTTTCCAAAGGGAGAGTCACAGTGAAGGAGGTTTTAGGGTTTAGAATCAAATCGCCTCTGAGGAAGG
ACGAGGTTGAAGAGAGGGATAAGCCTTTGAATGCTCCGATTAGATTCAAACTCATCGATGTTGCAATCGCCATTGCTAAGAGAAGC
TAGGGTTTTTTTTTTGTGAGGATGAAGAAGATAACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACQ90306 auxin-repressed protein 1 [Brassica rapa subsp. pekinensis]9841e-104
NP_198911 50S ribosomal protein L27 [Arabidopsis thaliana]9501e-100
XP_002870663 hypothetical protein ARALYDRAFT_493880 [Arabidopsis lyrata subsp. lyrata]9455e-100
AAM62675 50S ribosomal protein L27 [Arabidopsis thaliana]9383e-099
XP_002509506 ribosomal protein L27, putative [Ricinus communis]6992e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q9FLN4 50S ribosomal protein L27, chloroplastic9505e-102
P30155 50S ribosomal protein L27, chloroplastic6559e-068
O65037 50S ribosomal protein L27, chloroplastic5823e-059
A6Q4D3 50S ribosomal protein L273134e-028
Q10ZG7 50S ribosomal protein L273134e-028

TrEMBL top hits (Blast detail)Scoree value
C4PJS4 Auxin-repressed protein 19849e-105
Q8LEF5 50S ribosomal protein L279382e-099
B9RBH2 Ribosomal protein L27, putative6991e-071
A5BCW1 Putative uncharacterized protein6792e-069
A9PJG1 Putative uncharacterized protein6551e-066

Arabidopsis top hits (Blast detail)Scoree value
AT5G40950.1 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27); structural constituent of ribosome9514e-103
AT2G16930.2 ribosomal protein L27 family protein2256e-019
AT2G16930.1 ribosomal protein L27 family protein2256e-019
AT2G16930.3 ribosomal protein L27 family protein2256e-019
AT5G15220.1 ribosomal protein L27 family protein2256e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
117  64%
 
121  9%
 
63  27%

Unigene MembersMember information