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Information for unigene UN09569
| FASTA Sequence |
| Unigene ID: UN09569 | Length: 1301 |
SSR | SNP | GGGATAGGTAACGATTCAGAGAGAGAGAGAGAGAGAGAGGGTCAAATCAAACGTAGATTTCAAGCAATGGCATCGATGACAATGAC
AGCAACATTCCTCCCCGCCGTCGCTAAGCTTCCGTCAGCCACTTCCGGACGAAGGATGTCCGTGGTTAGAGCCTCAACGAGCGAGA
ACACACCCAGCTTAGAAGTCAAGGCCAAGGAGGAACAGAGAAGCACCACAATGAGGAGGGATCTCATGTTCACGGCTGCAGCTTCT
GCCGTTTGTGCCTTGGCTAAGGTAGCCATGGCGGATGAGGAGGAGCCCAAGCGAGGGACAGAAGCGGCTAAGAAGAAATACGCTCA
GGTCTGCGTCACAATGCCTACGGCCAAGATCTGCCGCTACTGATTCAACCATCCCACCTTTCATGTCCCTCTCTCTATCTCTTTAA
ATTTTCTCAAATTTGGTATGTAATCATATATTTGGATCAAAATCTTATAATCTTCGACTAGACTTCCTTTTCATTATAATGAAAAC
TTAAAAGAAGCATTGCATAGTGAATTACAATAGAGTTTCTGAAAACTAAAGCGGCCTAGGTTATAACACCGGACAAATCCAAACTG
AAACCAAACTACTACCAATTTTATTCAAGTAGAATTATCACCTGGTCACACATTACCTAATCACCTTAAAACGTAGAGCAATGCCT
CTCTCTTCCAACCTCGTGTTAGCAAACACTTTCCCATTCTCATCTCTAACAGTGCATTCCCCACCACCTATCACCACCGAACCGCC
ACCTGATGTCAGCTTACTAATACTCAGCACGTTTCTATCAATCCCCGGAACGAAAAGCACGTTCTTGATCAACTTCCTCACACCCT
TCATAGTAATCTTCACATCTCCTTTCCCTTCCGCCATAACAACGTTCCCATTAGCCATTCCAACACGAGCTTTGTACGTTCTGTCC
AAAGTGCTGAAAACCTTCAAATACGGAGTCATGTGGTCGAAAGCAGTGGAGTACACCATCCACATATCTTCACCGTATGTGAAATC
ACCCGTAGTCACAGCCACCATCAAATGCTCAGGCTTCCCGTTCTTCTTCGCTGTACAACCTCTCGCACACTCCCCTCCTCTCCTCG
CTCCACACACATGGCACTGTACACTCGTGTCGCTACGGTAACAGTCTTCTTGATTGTGATCGTACTTCTTGCACAAGCCACACCAC
ATCTGCTCAGACTTGGCTTTCGCAAGACTCTTGTGATGCTTCTTGAGCTCTTGCGTCATGTATTCGCCTGGATGATCTCCAAACAG
TTCGAGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB01446 unnamed protein product [Arabidopsis thaliana] | 572 | 2e-056 |
| BAB01445 gag-pol polyprotein-like [Arabidopsis thaliana] | 508 | 4e-049 |
| ABD91572 unknown [Brassica rapa] | 486 | 2e-046 |
| XP_002862672 hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp. lyrata] | 461 | 1e-043 |
| NP_566674 photosystem II subunit T [Arabidopsis thaliana] | 460 | 2e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39195 Photosystem II 5 kDa protein, chloroplastic | 460 | 7e-045 |
| P31336 Photosystem II 5 kDa protein, chloroplastic | 208 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJC9 Similarity to retroelement pol polyprotein | 572 | 1e-056 |
| Q9LJD0 Gag-pol polyprotein-like | 508 | 3e-049 |
| Q1WBW8 Putative uncharacterized protein | 486 | 1e-046 |
| Q9LJC8 Gag-pol polyprotein-like | 428 | 6e-040 |
| Q0WNA8 Putative uncharacterized protein At3g21010 | 378 | 4e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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