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Information for unigene UN09588

FASTA Sequence
Unigene ID: UN09588Length: 1798  SNP
GGGAGAATGTAAGTCGTATTGCATATCAAAGGGTACACTTCACAACACTAATTATGGTGATCAATCTCAACTAAAGATATGAAAAT
ACACAAAACAAACACATTTGAATTTATTGATAAAATCAATAATTATTCGACCAACAGCATGTAGGTTACACTTCACAACAATAACA
TCTCAAAGACCGAGCAAGAAAGGGAAACCGGTCGAACCTAACCAGCCCCCACCACCGATAAACTGACCAGCAGTATATCTCTGGGC
TTCAGCAGCAGCAGTGATTACCTTAAAGCCTCTCCACTTCACTCTCCTTGCAGTTCCAGCCCCTGCTCCTTTGTTCGCATACTCTC
TATATGTCAAAGTGTTCAACGCAAAAGTCCCGGTCCACTCGGACCACCCTTCTGGTCGGATGACGTCGGAAATATCCGACTGCATG
ATCACTGTCTGAGAATACTCTTTCCACGGCCGACCAAGATACGTCGGGAAACTACTTTTCACGGGCTGCAAATCCGACGTGGCACC
GATCCTACATTTTTGGATAACGATCCCTGTGTTCTGGTTAGGATCGGTCCTTCCTTGGGCTGTGACCATGTTTTTCTGGCCGGAGT
TTGGTCGGCGAGCATGGATGTCACAATCTTGGAGAACGACGGCAGCGTTTCCGAAGATAAAGTCGACGGTTCCAGCGATGAGGCAT
TTGACGAAGTACTGACGGTTAGAGTGGACGTAGAGAGTGTCTTGGTAAGCTAATATGTCGCATTGGTAAAAAGCAGAGAAGTCAGA
ACCGACGCGGAGAGCCACCGCTTGGTGCTTCGACGGACCTGCCGTATTTTGGAAAGTGATGTCACGCGCTAGAAACCTTTCGCCGA
CAGCAGCAACGGTGGCAGAGTGAAAGGTGGTGCTACCGTCGACGACATTTCTATTTGCGGTAATAATAGTTCTTGTCCGACCATCA
CCCATAAACATTATTCTTTTTCTTCTTCGAAACTTCCACATTCTCTCTATAAACACCTGCTTTTATATGTATCACATACCTATTCT
TACTATTATCCGGGGCCGCTGCAACCGCAGCCGCAATTGTCTTGAATTTACCGCTACCGTCAGCAGCCACGGTAGCATCGGCTCTC
ACTGAAGACCCTTGAAGAAGCCTCCTATCTCCCGCGGATAACCAAGTAGGCCACCCCTCGGCGTCTGCTTCTCCGGAACCGGCAAT
ATCTACGGCCATCGTAGTATCCTCCTCCTTGAGTTTACGGTTGTTTGAGAAGGATTTAGCTTTTAGCTCGAAATTGGCTATGTCGG
TATCAGTCATGTTCTTGATCATCGCTAGTGCGTTGCTGCACATGTGCTCGACGTGTACCTGACCCTTCAACAAGACCTTACGGACT
TTCTTATCAGCATCGTCATGAGAGAATCCATCGAGACAAGTCTCCTGGTTGGTAATGGCAGAGCTTATTAGGGTTTTGAGATCACC
AGCGTGTTCCCGTAGAGTTTTCTTGTTAGGATACATTTGGAGATCTTCCAGTGTCTCATGAAGCTCATCAAGGGTCTCATCAATAG
TCTCCAAACAGTCATGAAGCGCCGTCTTCTCACGTGGAGTCAGTCCTTTCCTGTTCTTGATCAGTTTCTTCACGGTGAAGTAATTG
TGTTCCACGGCGGTTGTTGTTAGGTTAAGCGATGCCTCAATGACGTCTTTCTGCGACGTAAGTTTGACGCCGCCAGGTGTGGCCAC
GGCGGAGACGCAGAGGTCATAGTAAAGCGTGGAGCTGAAAGCGGATCTTAGCACGGCGTGAGATGACGGTGATAGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188048 pectinesterase 3 [Arabidopsis thaliana]13188e-143
AAC72288 putative pectin methylesterase [Arabidopsis thaliana]13188e-143
AAL24278 AT3g14310/MLN21_9 [Arabidopsis thaliana]13188e-143
BAD95369 pectin methylesterase like protein [Arabidopsis thaliana]13188e-143
XP_002885033 ATPME3 [Arabidopsis lyrata subsp. lyrata]13115e-142

Swiss-Prot top hits (Blast detail)Scoree value
O49006 Pectinesterase/pectinesterase inhibitor 313183e-144
Q42534 Pectinesterase 212054e-131
P83948 Pectinesterase 311518e-125
O04886 Pectinesterase 111501e-124
Q43143 Pectinesterase/pectinesterase inhibitor U111169e-121

TrEMBL top hits (Blast detail)Scoree value
Q56W36 Pectinesterase13186e-143
Q9SEE6 Pectinesterase11691e-125
Q9LEB0 Pectinesterase11619e-125
B9GXZ8 Pectinesterase11601e-124
Q84V57 Pectinesterase11601e-124

Arabidopsis top hits (Blast detail)Scoree value
AT3G14310.1 ATPME3; pectinesterase13192e-145
AT1G53830.1 ATPME2; pectinesterase12063e-132
AT5G53370.1 PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase8578e-092
AT1G11580.1 PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase8434e-090
AT3G60730.1 pectinesterase family protein8282e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  25%
 
82  25%
 
181  13%
 
111  13%
 
122  25%

Unigene MembersMember information