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Information for unigene UN09605

FASTA Sequence
Unigene ID: UN09605Length: 903 SSR 
GGAAGCCACCGTCGAGTTCATTTACTTTATACTGTCTCTCTCTCTCTCCTCCGTCTCAGATTTCTTCTCCGTTAGGAAAACTCCAA
ATCTCCACTCAGAGAACCCTAATAATCTTCCCGATGTCGATCTTCGAGTACAATGGAAGTGCCGTTGTGGCTATGGTTGGGAAGAA
CTGCTTCGCCATCGCCAGTGATCGTAGGCTCGGGGTGCAGCTCCAGACGATCGCTACCGATTTCCAGAGAATCTCCAAGATCCACG
ACCGTGTCTTCATCGGCCTCTCTGGTCTCGCCACCGATGTCCAAACACTGTACCAGCGCTTGGTGTTTCGTCATAAGCTGTACCAG
CTTCGTGAAGAGAGAGACATGAAGCCTGAGACTTTCGCCAGTCTCGTCTCCGCCATTCTCTACGAGAAAAGATTTGGTCCTTACTT
ATGCCAACCAGTGATTGCCGGATTGGGTGAAGATGACAAGCCCTTTATTTGCACCATGGACTCCATTGGAGCCAAGGAGTTGGCTA
AAGATTTTGTTGTGTCTGGACTGCTTCAGAATCACTTTATGGTGCCTGCGAAGCTATGTACAAGCCAGATATGGAAGCGGAGGAAC
TGTTTGAGACGATATCCCAAGCACTTCTATCGTCAGTTGACCGTGATTGTCTGAGTGGTTGGGGAGGGCATGTCTACGTTGTAACA
CCAACGGAGATTAAAGAGAGGATCCTAAAGGGAAGGATGGACTGATCCGACTCGCCACGCCATCATCATCACTTGCTTCCATCCAA
GATGTTTTTCGCTGTAATCCGGTTTAATCATAGAATCATTCATTCTCTGAAGTTATGTTATGACTTTTGGATGAAATTTGAATTTC
CTCTCTTTGGATATTTTATTTTAATTCCTACTAGAGTTAACGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564149 proteasome subunit beta type-3-A [Arabidopsis thaliana]7045e-072
XP_002890456 predicted protein [Arabidopsis lyrata subsp. lyrata]7001e-071
AAM62756 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]6955e-071
NP_565156 proteasome subunit beta type-3-B [Arabidopsis thaliana]6874e-070
XP_002887683 hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp. lyrata]6874e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q9XI05 Proteasome subunit beta type-3-A7042e-073
O81153 Proteasome subunit beta type-3-B6872e-071
Q9LST7 Proteasome subunit beta type-36631e-068
O65084 Proteasome subunit beta type-36631e-068
Q55D66 Proteasome subunit beta type-34372e-042

TrEMBL top hits (Blast detail)Scoree value
C6SXW4 Proteasome subunit beta type6758e-069
C6SV91 Proteasome subunit beta type6712e-068
Q93X33 Putative beta 3 proteasome subunit (Fragment)6694e-068
B9H7H5 Proteasome subunit beta type6668e-068
C5Z6N6 Proteasome subunit beta type6668e-068

Arabidopsis top hits (Blast detail)Scoree value
AT1G21720.1 PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase7042e-074
AT1G77440.1 PBC2; peptidase/ threonine-type endopeptidase6872e-072
AT1G77440.2 PBC2; peptidase/ threonine-type endopeptidase6872e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  75%
 
71  25%

Unigene MembersMember information