RadishBase

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Information for unigene UN09637

FASTA Sequence

Unigene ID: UN09637	Length: 785		SNP
GGATACACAAGTACTTCTAATAATAATTGAGCTTGTTAAGTTAGAAAATGGGATTGACTGGTGTTCTTCATGTGGAGGTTGAGGTG AAGTCTCCAGCAGAAAAGTTCTGGGTAGCACTCGGTGACGGTATCAATCTCTTTCCCAAAGAGTTCCCTAAGGACTACAAAACAAT GCAAGTTCTTGCCGGAGATGGCAACTCTCCTGGTTCCATTCGCCTCATTATTTATGGAGAAGGATCCACGCTGGTGAAGGTCTCGG CGGAAAGAATCGAAGCAGTGGATCTGGAAAACAAAAGCATGACGTACAGCATCATCGGCGGTGAAATGTTGGAATACTATAAGACG TTCAAAGGAACCATCACCGTTACTCCCAAGGGCGGTGGCAGCATTTTGAAATGGTCTGCTGAGTTTGAGAAGACCGGCCATGAGAT TGAAGATCCACACGTCATCAAGGACTTTGCTGTCAAGAACTTCAAAGAGATCGATGAGTATCTCCTTAAGCAATCCAGCGTCTAAA CTCTAGAAGCTTCTATTATATATTTATATATAAGGGGCTTCAATCATCTCTATCAGTTTATTGTTGTCTAATTAAGAAGTTAAATA AAGTGGAACCTCCTTATGAATAATTATGTTTATGATTCCGAAGTCTGAGTATTGGAGATACACTACGTGTCTTTGAATATATGTAT ATGCATGATATCTAGGTAGTACATTTTATTAACACACGATTTAAACAATTCAAAAACGTTTTTTGTTGACAAAAAGGCTTGTAGTT CACCTATTTAG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ABV89615 bet v I allergen family protein [Brassica rapa]	785	2e-081
AAM65899 pollen allergen-like protein [Arabidopsis thaliana]	727	8e-075
NP_173813 MLP-like protein 423 [Arabidopsis thaliana]	726	1e-074
XP_002893317 bet v I allergen family protein [Arabidopsis lyrata subsp. lyrata]	725	1e-074
AAF87152 T23E23.17 [Arabidopsis thaliana]	722	3e-074

Swiss-Prot top hits (Blast detail)	Score	e value
Q93VR4 MLP-like protein 423	726	5e-076
Q9SSK7 MLP-like protein 34	240	1e-019
Q9SSK9 MLP-like protein 28	225	6e-018
Q941R6 MLP-like protein 31	222	1e-017
Q9SSK5 MLP-like protein 43	221	2e-017

TrEMBL top hits (Blast detail)	Score	e value
A8IXG5 Bet v I allergen family protein	785	1e-081
D2D328 Major latex-like protein	471	3e-045
B9SZH7 Major latex protein, putative	468	6e-045
B9HVC5 Predicted protein	464	2e-044
C6SYW1 Putative uncharacterized protein	461	4e-044

Arabidopsis top hits (Blast detail)	Score	e value
AT1G24020.1 MLP423 (MLP-LIKE PROTEIN 423)	727	3e-077
AT1G70850.1 MLP34 (MLP-LIKE PROTEIN 34)	240	1e-020
AT1G70850.3 MLP34 (MLP-LIKE PROTEIN 34)	240	1e-020
AT1G70830.2 MLP28 (MLP-LIKE PROTEIN 28)	225	6e-019
AT1G70830.1 MLP28 (MLP-LIKE PROTEIN 28)	225	6e-019

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	11			31%


12	16			44%


6	6			17%


11	1			3%


9	2			6%

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