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Information for unigene UN09647
| FASTA Sequence |
| Unigene ID: UN09647 | Length: 972 |
| SNP | AAAAAATATTTAAGTTTTCTCGACTGAATTTTTATTCCATCAAATTCTTGTGTGACATATATCTTTGAAAATTCCATGTCTCCTTC
ACATCTAATCCTATAACGAATTTAACCAAATGAGATACAAAAGAAAAAGAAATTAAAGTGAAAGAAAATCTATTGAGATCGATCTA
TGAGAGGATTATTTGTTAAGCCCTATATAAATGATTCTTAAATCAAGAAAATAAAAGCTAAGAAGAAACAATGAATTGTGTTGAAG
GCAAGTCGAGTTTACTGTCTTCAACGAAACCATCATGATGCTCGAACTCGTTAGAAGCCTCTTCTACAGGCTTAACGCCCCCACAT
TCATCAATGAAGCCACCCTTCATATTCACTGTTGTTGATGAATCTTGAAGTTGAAGACACCACATGTCTTCTTGTAACCCATTGAA
GTTTCCAGAAGAACAAAATTGTTGTTGTTGGTTTGGTTCTTGTACATGATGAAGCGGGTAATTGTAAGGAATCGAGTTGTTGTCGT
TTAGATCACAGAGAACTCGAGAGATCCTCAGGTTCTTGCATCTGCATATGCGGCTCTTGATGATAATGATTATGAGCACGGTCACG
AAACACAGCCAATTGATGAAGAACCATGTCCAATTCATTCTTATTATATTCGATCTCGTACTGAAGCCTTCTTATGATGCTATAGC
AACCTTCGATGGGATCATTGGCACGAGCATCAGACTGAAACATGATTGTATGCATAGCCGCGTCTTTCTCAGGAGGGCTAAGGTCT
TTGATGATCTTGGTGATGTTGCTGACACCAAAGAGCTTATGCGCGTTGAGGAATTGTCGGTGACGGTCGTGAGGGAAATAAGGGGC
GAGAAGACAATCGGGAGCGCATTTCCTGCGTTGGTATTTGCATGCTGCGCATGCTTGGTTTGTGGTATTGGTACTGCTTGAAGGTT
TTAATGGTGTTGTTTGTTTGTGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188001 LOB domain-containing protein 22 [Arabidopsis thaliana] | 673 | 2e-068 |
| XP_002882855 LOB domain family protein [Arabidopsis lyrata subsp. lyrata] | 650 | 1e-065 |
| XP_002527399 LOB domain-containing protein, putative [Ricinus communis] | 510 | 2e-049 |
| XP_002327547 predicted protein [Populus trichocarpa] | 476 | 1e-045 |
| XP_002329621 predicted protein [Populus trichocarpa] | 473 | 3e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRW1 LOB domain-containing protein 22 | 673 | 9e-070 |
| Q9STS6 LOB domain-containing protein 27 | 300 | 2e-026 |
| Q9SSM9 LOB domain-containing protein 7 | 291 | 2e-025 |
| O04479 LOB domain-containing protein 6 | 278 | 6e-024 |
| Q9FML4 Protein LATERAL ORGAN BOUNDARIES | 278 | 6e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SN30 LOB domain-containing protein, putative | 510 | 1e-049 |
| B9MWT1 Predicted protein | 476 | 1e-045 |
| B9N2X9 Predicted protein | 473 | 2e-045 |
| C5YKR7 Putative uncharacterized protein Sb07g019940 | 357 | 6e-032 |
| B6TET9 Putative uncharacterized protein | 354 | 1e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13850.1 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) | 673 | 8e-071 |
| AT3G47870.1 LBD27 (LOB DOMAIN-CONTAINING PROTEIN 27) | 300 | 2e-027 |
| AT1G72980.1 LBD7 (LOB DOMAIN-CONTAINING PROTEIN 7) | 291 | 2e-026 |
| AT1G65620.1 AS2 (ASYMMETRIC LEAVES 2); protein binding | 278 | 5e-025 |
| AT1G65620.2 AS2 (ASYMMETRIC LEAVES 2); protein binding | 278 | 5e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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