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Information for unigene UN09650
| FASTA Sequence |
| Unigene ID: UN09650 | Length: 1357 |
SSR | SNP | TGTCTGTGTGATGTAAGGACGCTTTTTACTGTGTGTTCCCCCTCACATCAAATTCTCCGTCCCAACTAAAGTTTCGATCAAGTTTT
GTACGAAAAGCACGAATCTTTAAAAAAAAAACCAGTGAGAGGGGGTCCGGTCCTGTCTTTATAATCAAATACTATGTCCTAAAAAT
TCTGATGAGAGATCCGGTTAATAAGAGAGAGTAAAACTTTTTATTAATAAAAGGTCACAGATAGATATTTTTTTTGTTCTTTTTTT
GGTTGTGTGTGTTGTGTGTGTGTGATATGGGAAACGTGAACGGGAGAGAAGAAGAAGCGAATAGTAACCACCACCAGAACGACGAC
AACGCTGCAACTGAGATTAGCAGCTCTCATCATCATCAAGCTTCCGACTTTGCAGCACCTATGGGTGGTCATCAATCTCCTCCTCA
CAGCCCTCGCGCCACTCAGTCTCCTCTCATGTTCGCTCCTCAGGTACCGGTGATTCCTCTGCAAAGACCAGACGAAATCCACATCC
CAAACCCTTCCTGGATGCAGCAATCGCCTCCTTACGAAGAGGCTCCCAACGAGCAAGGGATCCCCACTATGATCACTTGGTGCCAC
GGCGGCAAAGACATCTCTGTTGAAGGATCTTGGGATAATTGGAAGTCAAGAAGTCGGCTGCAGAGATCTGGTAAAGACTTTACTAT
AATGAAAGTGCTTCCTTCAGGTGTCTATGAGTACAGGTTCATCGTCGATGGTCAGTGGATGCACGCCCCTGAGCTCCCTTTTGCTC
GTGATGACGCTGGCAACACTTTCAACCTTTTGGACCTCCAGGACTATGTTCCTGAAGACATTCAAAGCATATCTGGATTCGAGCCT
CCTCAATCTCCAGAGGCTAGTTACAGCAGCTTGCTTCTTGGAGCTGAGGACTACTCCAAAGAACCGCCTCTCGTTCCGCCTCACTT
GCAGATGACTCTTCTGAACCTGCCCGCCAGGCAACAACCCTGACGGTCCCTCGCCGCCGCTGCCGAGACCTCAGCATGTTATTCTC
AATCATCTCTACATGCAGAAGGGCAAGAGCGGTCCTTCTGTGGTTGCCCTTGGTTCCACTAACTGCTTTTTGGCCAAGTATGTAAC
TGTGGTGCTCTACAAGTCCCTCCAGAGGTGATCTGAGTTTACATGCGGTTATCTAAGTTTGGTGTTTTTAAAAGTTAACTCATGGA
GAATGGGTGAGAGATTAGTAATTGCTAGCAAAGTTATTATTGTAAAGCCGGCAAATCTCTCTCTTTTTTTTGGGTTTTGGTTTGTT
TGGCTTTCAAGTTTTCACAACAGTTGTCTCACACCTGCTAGTCTTACTATATTATTGTTTGGCTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 RecName: Full=SNF1-related protein kinase regulatory subunit beta-2; Short=AKIN subunit beta-2; Short=AKINB2; Short=AKINbeta2 | 974 | 4e-103 |
| XP_002870164 AMP-activated protein kinase [Arabidopsis lyrata subsp. lyrata] | 943 | 2e-099 |
| NP_193369 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 934 | 2e-098 |
| NP_001190741 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 934 | 2e-098 |
| CAB10413 kinase like protein [Arabidopsis thaliana] | 931 | 4e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 SNF1-related protein kinase regulatory subunit beta-2 | 974 | 2e-104 |
| Q84VQ1 SNF1-related protein kinase regulatory subunit beta-1 | 554 | 9e-056 |
| Q9QZH4 5'-AMP-activated protein kinase subunit beta-2 | 246 | 5e-020 |
| Q6PAM0 5'-AMP-activated protein kinase subunit beta-2 | 244 | 8e-020 |
| O43741 5'-AMP-activated protein kinase subunit beta-2 | 200 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V3H9 Uncharacterized protein At4g16360.2 | 917 | 1e-096 |
| B9HCD2 Predicted protein | 802 | 3e-083 |
| B9IH18 Predicted protein | 798 | 8e-083 |
| B9SA62 Snf1-kinase beta subunit, plants, putative | 785 | 2e-081 |
| Q7XYX7 AKIN beta2 | 768 | 2e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16360.1 AMP-activated protein kinase | 934 | 7e-101 |
| AT4G16360.2 AMP-activated protein kinase | 917 | 7e-099 |
| AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit, putative | 554 | 8e-057 |
| AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative | 468 | 8e-047 |
| AT2G28060.1 protein kinase-related | 122 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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