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Information for unigene UN09652

FASTA Sequence
Unigene ID: UN09652Length: 1031 SSR 
GGGAAGTTTCTTCGTTGAAAAGAAAAGAATTAAAAAGAGAGAGAGAGAAGAGTGAGTGAGGGAGAAGAGTCAGAAGACGACAGACA
AGTTTGCAGTTTCAATTCAAAGAAATGGCGGATAAGGCCGAGAAGATGAAGCTCCGGCAAGATTACCGGAACTTATGGCACTCTGA
TCTCATGGGAACCGTCACCGCCGACACTCCCTATTGTTGCTTGTCGTGTGTCTGTGGACCGTGTGTTTCTTACTTGCTTCGGAGAA
GAGCACTTTACAATGACATGTCCAGGTATACTTGCTGTGCTGGATACATGCCCTGTAGTGGGAGGTGTGGAGAAAGCAAATGCCCT
GAACTCTGCCTTGCTACTGAGGTTTTCCTCTGTTTCGGAAACTCTGTGGCCTCTACTCGCTTTCTTCTCCAGGATGAATTCAACAT
CCAGACTACAAAATGCGACAATTGCATCATTGGATTTATGTTCTGCCTAAGCCAAGTCGCTTGCATTTTCTCTATTGTTGCTTGCC
TCGTTGGTAGCGAGGAACTTTCTGAAGCTTCTCAGATACTCTCTTGCTGTGCCGATATGGTCTACTGCACGGTTTGCGCGTGTATG
CAGACTCAACACAAGCTTGAAATGGACAAAAGAGATGGAGTGTTTGGTCCTCAGCCAATGGGCGTTCCACCGGCACAGCAGATGTC
CCGTTTTGACCAACCTGCCCCTCCAGTCGGCTACCCTCCTGCATCTTACCCACCGGCTCAAGGCTACCCTCCTGCACCTTACCCGC
CTCCCGGTTATCCCCAACATTGAGAAAATTCAAACCAATATCTTCATATCGTGTGTCAAAGTGTTGTTGTTACTATTGTTCAGCTA
TTTTCTTCAGTTATGGGGTTGCTTTGCAAGTATTAGTACTCTGGTTTATGCACTAAAATCTTTGGTATCATCTGGTTTGTTGATTT
TGTTGGTATTTTTCTCTCATTTATGTGATGAACACAAAAGTGTGTAAACCTTGCTATGCTATATATGTGTGGCTGTATTCCTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887935 proline-rich family protein [Arabidopsis lyrata subsp. lyrata]11893e-128
NP_176568 PLAC8-like protein [Arabidopsis thaliana]11868e-128
NP_198955 PLAC8-like protein [Arabidopsis thaliana]10309e-110
ABK28735 unknown [Arabidopsis thaliana]10309e-110
XP_002870638 hypothetical protein ARALYDRAFT_330382 [Arabidopsis lyrata subsp. lyrata]10245e-109

Swiss-Prot top hits (Blast detail)Scoree value
Q54HX8 Protein LITAF homolog1254e-006
P09241 Rhodopsin1254e-006

TrEMBL top hits (Blast detail)Scoree value
Q9CAJ7 Putative uncharacterized protein At1g6383011865e-128
A0MFL3 Putative uncharacterized protein (Fragment)10307e-110
Q45GG6 Putative uncharacterized protein10307e-110
B9RCF3 Putative uncharacterized protein10064e-107
A9PIT6 Putative uncharacterized protein10039e-107

Arabidopsis top hits (Blast detail)Scoree value
AT1G63830.2 proline-rich family protein11872e-130
AT1G63830.1 proline-rich family protein11872e-130
AT5G41390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT1G63830.2); Has 12019 Blast hits to 5816 proteins in 448 species: Archae - 6; Bacteria - 1151; Metazoa - 4980; Fungi - 1500; Plants - 2605; Viruses - 338; Other Eukaryotes - 1439 (source: NCBI BLink).10304e-112
AT4G23470.1 hydroxyproline-rich glycoprotein family protein9902e-107
AT4G23470.3 hydroxyproline-rich glycoprotein family protein9802e-106

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  9%
 
98  73%
 
101  9%
 
71  9%

Unigene MembersMember information