 |
Information for unigene UN09676
| FASTA Sequence |
| Unigene ID: UN09676 | Length: 1105 |
SSR | | ATCATTCACCAATCTCTAGCCAATAGTCACACACACACACACACACACATACACACTCACAATGGCCACCGTCGCTAACTTCTCAG
CCAAACCAATCACCACCGTGATTCCACGGCTGTCATCCGCCGTTGCCTCCACCTCATCCTTCGTATTCTTCGACCCCAAACCCAAC
TCACTGATCCTAAAACAGAGCTGGGTTAAAACTCCCTCGAAAAGAAGATTCTCAGCCGTGAAGGTCAAGGCCAGTGCGGCGTCACC
AGGGAAGGTTGGTACACCGGCGGCGAAGGACGAGAAAGTGCAAAAGATTCACAGCGGAGAGGAGTTTGACGAAGCGCTTAAGAAGG
CCAAGAACAAGCTTGTGGTTGTGGAGTTTGCCACGAGTAAGAGTGATCAGAGTAGTAAGATATATCCGTTTATGGTGGAGCTGAGC
AGGACATGTAACGACGTCGACTTCTTGCTCGTCATGGGTGATGAGTCCGAAAAGACTAGAGAGCTTTGTCGGAGAGAAAAGATCGA
GAAAGTTCCTCACTTTAGCTTCTATAAGAGCATGGAGAAAATACACGAGGAAGAAGGTATCGGACCGGACCAGCTAATGGGGGACG
TGCTATATTACGGGGACAGCCACTCGGCGGTTGTGCAGCTGCATGGACGAGCTGACGTGGAGAAGCTGATTGACGAGAACCGTACT
GGAGGCAAGCTGATTGTGCTGGATGTCGGTCTGAAACACTGTGGACCATGCGTGAAGGTTTATCCGACGGTGCTGAAACTGTCGCG
GTCGATGTCCGAGTCTGTCGTGTTCGCTAGAATGAATGGGGACGAGAACGATAGCTGTATGGAGTTTCTAAAGGACATGAATGTTA
TCGAAGTACCAACTTTCTTGTTCATCAGACAAGGCGATATTTGTGGGCGGTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAG
ATTCTCCGGTACTCAGGCGTTCGTGTCACTTACTAATTTGTATCAAAACTCGATTGATTCAAAGAATTATGTTTTTGTGGGTTTTG
TTTGTACCATCCGATCGAGACCGGTTGAATATGAAAAAAACGCAAAGTTTGTGATTATTGGTTTGATTTTGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34107 unnamed protein product [Thellungiella halophila] | 1467 | 2e-160 |
| XP_002889056 hypothetical protein ARALYDRAFT_895485 [Arabidopsis lyrata subsp. lyrata] | 1369 | 5e-149 |
| NP_177735 thioredoxin-like protein CDSP32 [Arabidopsis thaliana] | 1332 | 1e-144 |
| AAM63182 chloroplast drought-induced stress protein, putative [Arabidopsis thaliana] | 1332 | 1e-144 |
| XP_002510599 conserved hypothetical protein [Ricinus communis] | 1029 | 1e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SGS4 Thioredoxin-like protein CDSP32, chloroplastic | 1350 | 4e-148 |
| Q84NN4 Thioredoxin-like protein CDSP32, chloroplastic | 945 | 3e-101 |
| Q6Z4I3 Thioredoxin H2-1 | 144 | 2e-008 |
| Q9XIF4 Thioredoxin H7 | 144 | 2e-008 |
| Q8IFW4 Thioredoxin-T | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R8F6 Putative uncharacterized protein | 1029 | 9e-110 |
| B9H5C2 Predicted protein (Fragment) | 1014 | 5e-108 |
| O04002 CDSP32 protein (Chloroplast Drought-induced Stress Protein of 32kDa) | 1001 | 2e-106 |
| B4FTP2 Putative uncharacterized protein | 943 | 9e-100 |
| A2YL83 Putative uncharacterized protein | 942 | 1e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G76080.1 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) | 1351 | 2e-149 |
| AT1G19730.1 ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 148 | 8e-010 |
| AT1G59730.1 ATH7 (thioredoxin H-type 7) | 144 | 2e-009 |
| AT3G17880.1 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 123 | 6e-007 |
| AT3G17880.2 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 123 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
