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Information for unigene UN09677

FASTA Sequence
Unigene ID: UN09677Length: 980  SNP
CGAACTCAGATCTTAATGTTTCATTGGTGTATCAGATTTATATTAATACATACATTTAACAATGCCACAAAATGGTCAATGGAGTT
TACAAACAGGAATGCCAGATTACTGAACCAAAAACCTTTTGTGTTCATCAACTTTTTCTTTAACAAAAAAAAAAATTGTTCATTAA
CAGTATGTAAAATATGCACAAACCAGACGCAGGGATATAGACGAAATCGGAATTGATCTTTTAGATCAATCATTCTTAAAAAGTTA
TTTTTGGCCTGTTGTCACTCCAACCACAACGTTGCTCACCAACTTTCCACTTTCATTAACGGACATTGGGTTCTCTACTACAACAG
TTTGTGTCTGAAACGGTGGTGTTGACTGAGTGGATGTAGAAGGCATAGTCCCGGGAGATGCTGTTCCATTTGGCCGGTTGCTTGCT
AAAGGCACCCTTCCATTGCTCATGTTAACGTTAGTAACAAACTGGCAAATAGCGCATTTAACAGATGATGCACCGTAAGGGTACAT
GAGTGTCGTCCTACAGTTCCCACAGTTGATATGAGCAACCTGATTAGACGGTGGGGGTCCTGGGACAAGGTTGACAGTCTGACAGC
AAGAGCATCTTACACTAGTAGCCCCACGGGTATACATGAGCATTGTTCGACAACCACCACACACAATGTGAGCCATGTCCATCCCA
TGGTGATGAGGAGGAGGAGGATGAAGAGGAACCATGTTGACAATGTGACATAACGCACAACGGACGTTCGTAGCTCCTCTAGGATA
CATCAATGTATTTCTACAGCCATGACACACTAGCTGGTCCTGCATATCTCTCTTGATTTCTCCACAGGGATGATGATAAGAAGAAA
AAGGAGGTGGCTTTGAAACCCCAAATCCAATTCAAAGCCAAAAAGCTTCGATGGAGAAGAGGGGATCCGATTGCAAAACCGGACAA
CTCTAAGAGCAGATATGCAAAGAGGCCAATCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63407 zinc finger protein [Brassica rapa]9823e-104
AAL50981 zinc finger protein LSD1 [Brassica oleracea]9591e-101
AAL50982 zinc finger protein LSD2 [Brassica oleracea]8831e-092
XP_002869934 hypothetical protein ARALYDRAFT_492829 [Arabidopsis lyrata subsp. lyrata]7942e-082
NP_849549 zinc finger protein LSD1 [Arabidopsis thaliana]7898e-082

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8W195 Zinc finger protein LSD19591e-101
Q8W194 Zinc finger protein LSD28837e-093
P94077 Zinc-finger protein Lsd17941e-082
Q8RXL2 Putative zinc-finger protein Lsd17833e-081
C0Z316 AT4G20380 protein7511e-077

Arabidopsis top hits (Blast detail)Scoree value
AT4G20380.2 zinc finger protein (LSD1)7956e-085
AT4G20380.1 zinc finger protein (LSD1)7893e-084
AT4G20380.7 zinc finger protein (LSD1)7893e-084
AT4G20380.3 zinc finger protein (LSD1)7832e-083
AT4G20380.4 zinc finger protein (LSD1)7832e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  8%
 
95  42%
 
102  17%
 
74  33%

Unigene MembersMember information