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Information for unigene UN09678
| FASTA Sequence |
| Unigene ID: UN09678 | Length: 815 |
SSR | | GGGAAGATCACCTTCTAAACCCAAATCATTTGCAAGCTTTTGGATTCGAGCTTCTTTCACTATGACTCTCTGTCTCCGAATCGCTC
CGTCACCGTTATCTTTCCGTTACTCTCCGGTTCCGGCAACCGCCTCCGGCGGAGGATTACGTTCCGTGAAGCAGCGTTGCCGGATC
CTGAACTCAGGCGTCGCGGCGGCGAAAACAGGATTCTGCTCCGGCGGTGGTGGTGTGTTAGATTTAAGGAAGAAGATCGGTTCCTG
TGTGGTGGTGAGGTGTAGCTTAGAGACAGTGAATGTCAGTGTCGGCGAGGTGACGGAGGTTGACAAGGACACGTTCTGGCCAATCG
TTAAAGCCGCCGGTGATAAGCTTGTTGTCCTCGACATGTACACTCAGTGGTGTGGACCGTGCAAAGTTATGGCTCCTAAATACAAA
GAGCTATCAGAGAATTACCAGGACATGGTGTTTCTTAAGCTTGACTGCAACGAAGACAACAAGCCAGTGGCAAAGGAGCTAGGAAT
TAAAGTGGTTCCAACCTTTAAGATCTTGAAGGACAGCAAGGTGATAAAGGAAGTGGTCGGGGCAAAATTTGATGAGTTACTTGCAG
CTATTGATGCAGCGAGGTCAGGCTGAGCCTCCCTTCTCTCTATATATAATATCACTTCCTGCTGTAGAGTATTAGGACAATTCTCC
ATCAACATGTAATTGGTTTGGTTCTATGTAAACTCTCTCTCTCTCTGTGCTGTTCCTTAACCGGATTCAGTTGTAATGTAACAGTG
TATGTATAAACGCTGGAAAGTTATGAAATACGCGATGGGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197144 thioredoxin F2 [Arabidopsis thaliana] | 768 | 2e-079 |
| XP_002873774 ATF2/TRXF2 [Arabidopsis lyrata subsp. lyrata] | 728 | 7e-075 |
| NP_186922 thioredoxin F1 [Arabidopsis thaliana] | 617 | 5e-062 |
| XP_002884335 thioredoxin F-type 1 [Arabidopsis lyrata subsp. lyrata] | 615 | 8e-062 |
| AAD35003 thioredoxin f1 [Arabidopsis thaliana] | 612 | 2e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFH9 Thioredoxin F2, chloroplastic | 768 | 7e-081 |
| Q9XFH8 Thioredoxin F1, chloroplastic | 617 | 2e-063 |
| O48897 Thioredoxin F-type, chloroplastic | 592 | 2e-060 |
| P29450 Thioredoxin F-type, chloroplastic | 489 | 2e-048 |
| Q8S091 Thioredoxin F, chloroplastic | 469 | 3e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FGW0 Putative uncharacterized protein | 504 | 4e-049 |
| B9RM61 Thioredoxin f-type, putative | 500 | 1e-048 |
| C6SZV5 Putative uncharacterized protein | 496 | 4e-048 |
| C6SWF1 Putative uncharacterized protein | 489 | 2e-047 |
| B6TR82 Thioredoxin F-type | 474 | 1e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G16400.1 ATF2; enzyme activator | 776 | 8e-083 |
| AT3G02730.1 TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator | 617 | 2e-064 |
| AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 186 | 2e-014 |
| AT5G39950.1 ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 176 | 3e-013 |
| AT3G08710.1 ATH9 (thioredoxin H-type 9) | 160 | 2e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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