Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09680

FASTA Sequence
Unigene ID: UN09680Length: 1172  SNP
GGAAGAGAGAGAGACTGTGTCTCTATTTCTCTGGAAACCATTCTCTGCAAGAAAACTTCTCTCTAAAACCCATTTCTTTCTCTCTC
GAAAAAGTTCCAAGCTTTACTCGAAAAAGACGCTCCTTTTTCTCTTCCCGCAATTTGGTTTCTCAAGGACAATGGCAATAGAGGAT
CAAGAGAACACAATCCGCGAATTCAAGCCTAAGAACAGAAGAATCATGGGAGCTGGTGGACCTGAGGAGGAAGATAACAGGTGGCC
ACCATGGCTGAAACCTCTGCTCAAAGAGCAATTCTTTGTTCACTGCAAGTTTCATGTAGACTCTCATAAGAGTGAATGCAACATGT
ATTGCCTAGACTGCACCAACGGCCCTCTTTGCTCTCTCTGTCTTGCCCATCACAAGGATCATCGCACCATTCAGATAAGGAGATCA
TCTTATCATGATGTTATAAGGGTGAATGAGATACAAAAGTATCTTGATATATCAGGGATCCAGACTTATGTGATCAATAGTGCTAA
AGTCGTCTTCTTGAACGAGAGGCCTCAGCCTAGGCCAGGGAAAGGTGTGACCAATACCTGCAAGGTTTGCTATCGCAGCCTCGTTG
ATGATAGCTTCCGCTTCTGCTCTCTTGGCTGCAAGATTGCTGGATCATCTAGAGGGTTTGAAAAGGGAAGGAAGAACCTTCTGACG
GAGACAGAGGATTCAGGTAGTTTCAGCCCATCAACACCTCCACTTACTGCATCTAGTAGTTGCAGAATTGCCAAGCGAAGAAAGGG
AATCCCTCACCGATCTCCAATGGGATAAAAAAAGAAGCAGCAAAAGAGTTAAAGCCAATACAGAAGCTTTTGCCATTTGCCAGTTT
CTTGTTCTATAAAGATAACTACACAGAAATGTATAGCTAATACATAAGCTTTGGTCTCTTATTTGCTTGTTTTAGCAAAAAACAAA
GGCCTTAAGATAGGTTTTGGCTTACTAATGGTAAGTCTGTGAATATGTAATGTGATGCAAAAAGGGGTAGAAAGGGAAATATAGGA
GGTTTTAAGGGTTAAAAGTGGGAATAAAACAAAATTAGCTTTGGTTTTTCATTATGTACAAGTGGTGTAAATGTGGTTTGGTTAGG
TGAATATATGGATCTGGAATATCAAATAAACAATGATGAGACTTATCACCTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870078 zinc-binding family protein [Arabidopsis lyrata subsp. lyrata]9691e-102
NP_193524 PLATZ transcription factor family protein [Arabidopsis thaliana]9682e-102
CAA17133 putative protein [Arabidopsis thaliana]8687e-091
ACJ84547 unknown [Medicago truncatula]8113e-084
CAL25342 putative zinc-binding protein [Platanus x acerifolia]7801e-080

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WUB8 At4g179009681e-102
O49689 Putative uncharacterized protein AT4g179008685e-091
B7FIG8 Putative uncharacterized protein8112e-084
Q0VJB4 Putative zinc-binding protein7808e-081
B9MU31 Predicted protein7556e-078

Arabidopsis top hits (Blast detail)Scoree value
AT4G17900.1 zinc-binding family protein9687e-105
AT1G32700.1 zinc-binding family protein6632e-069
AT4G17900.2 zinc-binding family protein6391e-066
AT5G46710.1 zinc-binding family protein6272e-065
AT1G21000.1 zinc-binding family protein5539e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  55%
 
122  18%
 
111  9%
 
182  18%

Unigene MembersMember information