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Information for unigene UN09684

FASTA Sequence
Unigene ID: UN09684Length: 856 SSR 
GGAAAAATAAAAATAGCAAATCTCTAAAACTGAATCGGATTCAGCAGAGCAGAGCAGCACACACTCTCACACATCTTGTAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGGTTACAAGGTCAACTCTCCGATGTTTCATCAGATTCAATCCCTCTGA
TGCTCGTCGCTCTCCTCGCTACTCTTTTCAAACACGTTCGCTCCTTCTTTCTCCGCTTCTCAGCCTCTAATCCTCATATCACCGAC
GACGACGACCATGCTACTTCCGTTACTTCAGGACTCGTGAACCTCGCCGTGCTAGCCGACCAGCTCAAACTCAACAGACTCTTCTC
CTACAGCTACGTTGACAACGCCGCGTCAGACTGCATCGTGTGTTTGTCTACGCTAAAGACCGGAGAAGAAGTGAGGAAGCTGGATT
GTAGACACGTGTTCCACAAGCACTGTTTGGAAGGTTGGTTACAACATCTCAATTTCAGTTGCCCGCTTTGTAGATCTACGTTGCTT
GCACATGGACATGGAGAAGGTGAACCGATCTCTCTTCACTCAGCAGCCACTGCTTCTCATTGAATTTTCTCTTTATGACACAAAAA
GAAAGGAAAGGAAAGAGAGAAGAAGAGTTTGGGGGTGTGTTTTTGATCTCGTTGCTTTCTCCTCTTTTCTTTTGGGTAATTATTTT
TTCAAAAAGGGGAATTCTCGAAATTCACTTCTTTATTTTCGTTTCTTTTTTTTTTTTGAGGAAATTTCGGACAGGTGTTGATGTAA
ATCTTTAGTATATGAGAAGTGTTTTTTGTGTTTAGATTTGTGTCTTGTTCAGATTTATAAAAATTTGAAGCTAATTTGTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565253 putative E3 ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]4527e-043
XP_002892849 ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]4527e-043
NP_172962 E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]4473e-042
XP_002312419 predicted protein [Populus trichocarpa]3774e-034
XP_002283507 PREDICTED: hypothetical protein [Vitis vinifera]3774e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZU51 RING-H2 zinc finger protein RHA2b5098e-051
Q9ZT50 E3 ubiquitin-protein ligase RHA2A4471e-043
P87237 Uncharacterized RING finger protein C4G3.12c1405e-008
Q9P7E1 Uncharacterized RING finger protein P4H10.071333e-007
Q8VEM1 Goliath homolog1244e-006

TrEMBL top hits (Blast detail)Scoree value
Q1H5F4 At2g011504525e-043
B9HJ71 Predicted protein3773e-034
B9HWB4 Predicted protein2142e-015
B9SJY5 Putative uncharacterized protein1991e-013
A9NTT7 Putative uncharacterized protein1684e-010

Arabidopsis top hits (Blast detail)Scoree value
AT2G01150.1 RHA2B (RING-H2 FINGER PROTEIN 2B); protein binding / ubiquitin-protein ligase/ zinc ion binding5097e-052
AT1G15100.1 RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding4471e-044
AT2G04240.1 XERICO; protein binding / zinc ion binding1541e-010
AT2G04240.2 XERICO; protein binding / zinc ion binding1541e-010
AT1G67856.1 protein binding / zinc ion binding1352e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
211  33%

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