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Information for unigene UN09694
| FASTA Sequence |
| Unigene ID: UN09694 | Length: 1087 |
SSR | | GGGACGATCTTCGTGCTGGTGATTGTGTTCTCATCGCGTAGCTTAGCAAAAAAAAAAAGCAATGTCTCAAAGGGAGTCTGAGTATC
GGATCCGACGAGCAACAGCTTCGTATCTGAGGGAAAAAGGAGAAGTTTTGGAGGAAGAGAGTATAACACGGGAGTACGGTTTGTAC
ACTGCAATGAATAATGTGATGAGATGTCTGAAGAAGCCGCAGGAAGAGGAGGAGGAGGAGGAAGGGGTTTATGCTATAGCTTCTAC
TTTTGGTTACTTGTACGAGTTGGTCCTACATTTGACATCACCGGAGGTGAATATTCCTGTTACTGGTCTTGGCGTTGGACCAGTCA
CCCCTGGGGATATAAGGAAGGCCACTCAACTGAGGAAGAAACATACCACCGTCTTGGCGTTTCAAGTCGAGGTGACTCCGAAGGCG
TCTCAACAAGCTCAAACTTTGGGAGTCAAAATCATCTGTGGCGACACCATCCAACACCTGTGCCAACAGTTTCGGGAGTTTAACAA
GGAACTGGGAGAGGATAAGAAGGAGTCAGAGAGTGATGTAGCACAAGTCTCCCCATGCCTCCTCTCCATCTTACCCAAGTGCGTGC
TCAACAAGGAAGACCCAATTGTCTTGGGAGTTTATGTTGTTGAGGGTTTTGTTAAGGTAGGGACTCCCTTATGCATTCCAAACCGA
GCTTTTGTCAATATAGGACGGGTTGCATGGATTCAGAAGGACCAGCGACCCGTCGAGTTTGCCAGGGAAGGCGATATGGTGATTAT
CAAGATTGTTGCTGCTGACCCCAAAACACAACAAGGGATGTTGCTGGGAATAGATTTTGACGAAACAGATGTGCTCGTCAGTCGCA
CCTCCAGGGTAGCTGTTTACCAGGTCGAGATCAACCCGTCAAATGGAGAAAAAAAAATAGAACAAACAAACGAAATGCCCTCATCA
TTTGAGTGATCAAATCTCTCTGTCATCTATTTCCTCTTGTTTTAAAGCTTCAATTTAGCTCTCTCTCTCTCTCTCTCGTTCCCTTG
TAATATTTACATGTGCCCCCTCTCTAATGTTAATCAATATTTATCTCTGCTTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873363 hypothetical protein ARALYDRAFT_908813 [Arabidopsis lyrata subsp. lyrata] | 680 | 4e-069 |
| XP_002889103 hypothetical protein ARALYDRAFT_476840 [Arabidopsis lyrata subsp. lyrata] | 518 | 2e-050 |
| XP_002267014 PREDICTED: hypothetical protein [Vitis vinifera] | 515 | 5e-050 |
| CBI18548 unnamed protein product [Vitis vinifera] | 515 | 5e-050 |
| XP_002528094 translation initiation factor if-2, putative [Ricinus communis] | 513 | 9e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O60841 Eukaryotic translation initiation factor 5B | 362 | 1e-033 |
| Q05D44 Eukaryotic translation initiation factor 5B | 362 | 1e-033 |
| Q5RDE1 Eukaryotic translation initiation factor 5B | 362 | 1e-033 |
| B2GUV7 Eukaryotic translation initiation factor 5B | 362 | 1e-033 |
| P39730 Eukaryotic translation initiation factor 5B | 274 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SQ25 Translation initiation factor if-2, putative | 513 | 6e-050 |
| Q9SRD2 Putative translation initiation factor IF-2; 73082-68138 | 511 | 1e-049 |
| B9I4W6 Predicted protein | 501 | 2e-048 |
| Q8RXM9 Putative translation initiation factor IF-2 (Fragment) | 496 | 6e-048 |
| Q0WNM6 Putative translation initiation factor IF-2 | 490 | 3e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G76810.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein | 511 | 6e-052 |
| AT1G76820.1 GTP binding / GTPase | 490 | 2e-049 |
| AT1G76720.1 GTP binding / GTPase/ translation initiation factor | 431 | 1e-042 |
| AT1G21160.1 GTP binding / GTPase/ translation initiation factor | 421 | 2e-041 |
| AT2G27700.1 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein | 193 | 5e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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