Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09717

FASTA Sequence
Unigene ID: UN09717Length: 810  SNP
ACTAGAAGCAATACTCAACTTTTGTTTACAATATCTTTATAGTTTATACACACGATTAATACATAATACCACACCACACAGCTTAC
TTAAGCAAACAACATATTTACACAAAATCATCTTCCATAAGCAAAAAAAAAAAATCTAGAATATAAGTTGAAAAACAAATTCTAAC
GAACAAAAAAAAAACTCGGTAAATCAAGCCAAGCCCCATGGTTTCCATAAATTACATTTTTAAAACAAATCATCGAACTGATGATT
GTGGCGAACCTCACTCTATTCCTTGCCGTGTTTCCTAGGTGAGAGCATGGAAACGTGGGAGCTCTTTAAAACATGCAGCCTCTTGA
CAGTTGATACAAACATCTCCCAAGGAACATCTCCGACCAGAACTTTATCTCCTTCAGTGTCTTCGTAGACCAAAGTGTATTGTCTG
TTTAGATCCGACGAATCTTTCTTAGAGAAGAGTTGGTCAACGGCATGTGAAAGCTGTTGGTAGTTGTTATAAGCCGAGAGGTTGAC
TTTTCTTCCGATGGGAACTCCTTCCATGTTGATCTTAACGTACAACTCTCTTTCTTCATCACTCTCAATCTTCTTTATCTCTTCCT
TTAGCTGTGCCGTTAGGTATCGCCGGGAAGATCTTACCGGCGGCCATCCCACCACAGGAGCTGCCTCCACCCTGTTACTGGAAACA
AAAGGTGTTTCTTTGGCGAGGCTTCTTTGTTTAGGTCCATTGATGTTGTTGGAAGTGAGTTGGTGACAAGGAGGAGCCAGCCTAAG
TTCCAGTCTCTTCTCTTCTTCCATTTCTTGGTTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568478 auxin-responsive protein IAA28 [Arabidopsis thaliana]7932e-082
ADL70762 indole-3-acetic acid inducible 28 [Arabidopsis thaliana]7887e-082
ADB93665 indole-3-acetic acid inducible 28 [Arabidopsis thaliana]7521e-077
ADL70765 indole-3-acetic acid inducible 28 [Arabidopsis thaliana]7322e-075
ADL70764 indole-3-acetic acid inducible 28 [Arabidopsis thaliana]7062e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q9XFM0 Auxin-responsive protein IAA287939e-084
Q75GB1 Auxin-responsive protein IAA172695e-023
Q9XED8 Auxin response factor 91826e-013
O24408 Auxin-responsive protein IAA181754e-012
Q6H543 Auxin-responsive protein IAA71664e-011

TrEMBL top hits (Blast detail)Scoree value
Q2VWA1 IAA287931e-082
D3K0K7 Indole-3-acetic acid inducible 28 (Fragment)7527e-078
C0HE49 Putative uncharacterized protein1991e-013
C0HHC6 Putative uncharacterized protein1991e-013
B4FK43 Putative uncharacterized protein1972e-013

Arabidopsis top hits (Blast detail)Scoree value
AT5G25890.1 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28); transcription factor7946e-085
AT4G23980.1 ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor1826e-014
AT4G23980.2 ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor1826e-014
AT1G51950.1 IAA18 (INDOLE-3-ACETIC ACID INDUCIBLE 18); transcription factor1754e-013
AT3G16500.1 PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor1639e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  20%
 
114  40%
 
71  10%
 
62  20%
 
91  10%

Unigene MembersMember information