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Information for unigene UN09718

FASTA Sequence
Unigene ID: UN09718Length: 1052 SSR 
GGATCTCAAAAACCAACAAAACAAAAAAAAAAAACTTTTTCAAATCCCTAAAAAAGATGTCGACGGAGGAAGAACCCAAGGTCGTG
GAGTCGGGAGACGCCGAAGCCGCCGAAGCCACGGTGACGACGACGGAGAAGAAACCTGCTAAAGCTAAAGCTAAGAAGACGAAGGA
AGCTAAGAAGAAGCCTGCTGCTGCTGCTGCTCCGAGGAAGAGAACCACTTCGTCTCATCCTCCTTACGAAGAGATGATAAAGGATG
CGATCGTGACGTTGAAGGAGAGTACCGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCAGAAGTCGCTTCCTCCT
ACTTTCAGGAAGCTTCTTCTCGTCAATCTCAGGAGACTCGTCGCTTCGGGGAAGCTCGTCAAAGTCAAAGCCTCTTTCAAGATTCC
TTCTGCTTCAGCGGCTAAACCGGCTGCGGTTAAGAAGAAACCGGCTGCTTCGGTTACTAAACCGAAGGGTAAAGCAGCTGCTGCTC
CTGCTAAGAAGGCCAAACCAGCTGCTAAAGGGACCAAGAAACCTGCTGCTTCTGCTGCTAAGCCTAAGGCAAAGACGACGACAACT
AAAACTGCTGCGAAGCCGAAAGTTACAGCGAAGCCTAAGACGAAGAGTGTAGCTGCGGTTTCGAAGACTAAAGCTGTTGCTGCTAA
GCCTAAGGCGAAGGAGAGACCTGCTAAAGCTTCGAGGACTTCGAGTAGGACGTCTCCAGGGAAGAAGGCTGCTCCTGCTAAGAAAG
CGGCTGCGCCTGTGGCTAAGAAAGCTCCGGCTAAGAGTGCGAAGGTGAAGTCTCCGGCGAAAAGGGCTTCGACGAGGAAGAAGTGA
TGATGGTTTAGCTTCTCTTAGGGTTAAAGTCTTTTGTATAATTGAATCGTCTATGAAGGGGGCTTGTTTTTTTTTACTTCCAAAGT
TTTATCTTTTGTTATATTTGTCTTTGGTTTCTTCTCGAAACCCTTTTATCTTTGTAATTTTTGGTTTGTTTGAAATTTTAATAGCT
ATATGTGATGATGGTTTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]8391e-087
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]8202e-085
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]6572e-066
NP_172161 histone H1.1 [Arabidopsis thaliana]6454e-065
CAA44312 histone H1-1 [Arabidopsis thaliana]6186e-062

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.28396e-089
P26568 Histone H1.16488e-067
P37218 Histone H15709e-058
P23444 Histone H14605e-045
P08283 Histone H14418e-043

TrEMBL top hits (Blast detail)Scoree value
B9GS56 Histone H16516e-066
B9H8I5 Histone H16061e-060
Q9AT20 Histone H1 (Fragment)5673e-056
Q40509 Histone H15621e-055
O65820 Histone H15558e-055

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.28395e-090
AT1G06760.1 histone H1, putative6487e-068
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2482e-021
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1854e-014
AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding1764e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
715  100%

Unigene MembersMember information