RadishBase

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Information for unigene UN09774

FASTA Sequence

Unigene ID: UN09774	Length: 1858	SSR
GGAGGAAAGTTTCAGAGTCAAACCAAAAAACAGTGAAAGAAAATAAGTCGTCGACCCATGCCGTGATGTCTCCTTCCTTCCTCTTC TTCTTCGCTGTATAAATAATAATTAATTAATTCTTCTTCTTCTTCTTCTGCATCGGAGCTATATCAATTGAAAACTAGGCTTTTGG ATCAGGAGAGTGAGATGTCAAACTATCCGAAGATGACATGCGTATCATCATCGCATCAGAATCTAATGGAGAAGCTAATGCAACTC CAGGAGAGGTTCTCCCATCTCCAAGCCGCCAGGAGAGAAGGGAGGCTTAACGATCACGCCCTTCTCGAAGCGCAAATCTCTCAGAA TCTCCGTGAGTGGCAGGCTGAACTCAGCGCTCCGTCTCCTGAATCTTCTCTTCTGGGTGGAAGTATTAGTCAGTTTTCTGAGGAGA TTGCTCGTCTGCTGAAGCTTAATGATGAAGAGGATGATGCTACTAGTACGCTCAAGGAACACGCTGCACCACCAAAGCCTGACGCT TTCGATCAGAGCTTGTGTTCTCCAGGACACTTGGAGTGGACAGCTGAGCCTTTCGATCAAACCTCTTTCGATGTGAATTTCTTGAG TGGTTTTGAGGATGATGTTAATAACTCGGAAACACATGGCCAGCAACTCCACTGTGCATTTCAAGAGTTTGATCCAAGCATAAACA CCGCTCCTGATTTCCATGCCCAAAAACTCAGCCACTTGGATATAACTTCTCAGCTCGATTACCATCTCTCAGAAGTGCGCCAGGAA TTCAACAACACCCCTTCTTCCGTTAAGCTTGATGTTTCCGACGAGTCTGAATTCACTACTCCATCAAGTGTCCGTGTGCCTCCTTC TGCCTTTCTGGGACCAAAGTGTGCACTATGGGATTGCACAAGGCCTGCTCATGGATCTGACTGGTACATGGACTACTGCAGTGACT ACCATGGGAATCTAGCTCTGAATGAAGATTCCCCTGGCACAGCACCTGTTTTAAGACCTGGGGGGATTAGTCTGAAAGACAATCTC TTGGTTGATGCTCTTCGTGCAAAGACTCTGGGTAAGAATGTTGGCATCCCGGTGTGTGAAGGAGCTGTTAACACAAATGCCCATGG AACGCAGCAGAGCTATTTCATCTTGAGCTGGTTGAGGGAGAAACAATCAGAGAATGGCTCTTCTTCGACAAACCCAGAAGAGCATA TGACAGCGGAAACCGAAAGCAAAGATCACTTCCAGATTACAACGGACGAGGCTGGCATGAATCAAGGAAACAGCTGATGAAAGAGC AAGAAGGCCAGAAAAGATCTTACTACATGGATCCACAGCCTCCTGGTCCCTTCGAGTGGCATCTCTTTGAGTACCAGATCAATGAG TCCGATGCCTGCGCCTTGTACCGACTAGAGCTCAAGTTGACAAACGGAAAGAAGAGTCCTAAGGGAAGAGTCGCAAAAGACCCTCT GGCTGATCTGCAGAAGAAGATGGAGAAGATGGGACAGTTGACACCTGAGGTGGCTTCAGACAAACCGTCGCCTCCAACAAAAAGTC GTGCAAAGGCTGCCAAAGGAGTTAAAGCAGCAACTGGCAATCTAACTCAAGAGACTACGGTTCCTGCAACAGCAGCTTCAACGTAT GGGCCAAACAATGAGCCGTGATGGTGTTTCAGTATCTGAGTACTATCCGATGAGAGATAGATAAGGATCATTATAGTTATAACCTC TTTTTTTTTTTTTGAGAACCTGTGATGAGTTGTAAATGTTTTTAGCTTCTCTAAAGCCGCTTTGGGTTTCGTGAAAAAAAAATTCT TGTGGAATTCTCTTGTATCATGTTTCAATATTCGAAAAGTTCTCGTGTTCTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002881843 hypothetical protein ARALYDRAFT_483334 [Arabidopsis lyrata subsp. lyrata]	1194	2e-128
XP_002862497 hypothetical protein ARALYDRAFT_497425 [Arabidopsis lyrata subsp. lyrata]	1192	3e-128
NP_565972 vascular plant one zinc finger protein 2 [Arabidopsis thaliana]	712	2e-072
XP_002330715 predicted protein [Populus trichocarpa]	621	6e-062
XP_002326034 predicted protein [Populus trichocarpa]	583	1e-057

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9SLB9 At2g42400/MHK10.12	1152	1e-123
B9N623 Predicted protein	621	4e-062
B9IQS1 Predicted protein	583	1e-057
A5CA22 Putative uncharacterized protein	565	1e-055
B9N9L2 Predicted protein	554	2e-054

Arabidopsis top hits (Blast detail)	Score	e value
AT2G42400.1 VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activator	1152	5e-126
AT1G28520.1 VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN); transcription activator	545	1e-055
AT1G28520.2 VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN); transcription activator	545	1e-055

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	4			67%


21	1			17%


6	1			17%

Unigene Members	Member information