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Information for unigene UN09783

FASTA Sequence
Unigene ID: UN09783Length: 1696 SSR 
TCGCGATCGGTGCCCTGTTCATCTTCCGTCCTGTGGATCGTGATCTCACGGTTGAAGCCAACCTTACTGCCTCGGAGTCACTACAT
GTCTCTCTCTCTCCGTCTTTTCGTCAAACCCATCTCTGATACATATCTAGGCTGTGATGGATCCATCCAGCACAGAACGCAAGCGC
AGCAGGGATTGGTGGAAGCAACGATGGGGGTATCAAACAAATGATGGAACTGCAACTACGTCTGAAGATTTAAAGGAGAATCTGAA
CCAATTCATAAACTCTATTCAGAAGACTTTGGGACTCCTTCATCAGTTACGCCTTACTGTCTCTTCTTTCACACCCGCCTTCTCAG
CCTCAACTCTCTCGTGTCGGAGCTGAATAGCATGGCTAAGTTGTCCGAGAAATGCAACATTCAAGTCCCCATGGAAGTTCTTAGTT
TGATTGACGATGGAAAGAACCCGGACGAGTTTACAAGCAAGGGATGTTATTAATAGCTGCATCAAGTTACAAAAGGCAAAACTGAT
GCTTTTAAGGATTTGAGAAAACATATTCTGGAGGAGCTTGAAGAGACTTTCCCTGATGAAGTTGATAAGTATAGAGAGATCCGTGC
TGCTTCTGCGGCTGAAGCGAAACGGCAGGCGCAATCTCAAAGTGTCTTGTTACCCAATGGGGATGCTAAGGTCAAGAACGAGATTC
AGAAGCTCTATCATCACCATGGATGCAAAAGGAAAAGGAAAAATGGTGGAAGAACTTCCGATGATGGGTGAAAGCTTCACCTCCAG
GTAAATCCTTCCTTTATCTTTTACTTACTTAGCTCATATTGTTTTGTGATTTGACTTGAATCGTTATTTCTAGTGAGAGTCTTCCC
CTCCTTGCTGCAACCGATCATGAAACCGATCATGAGGATGTGGGTGATGCAAAAGTGACCATATCTCTGGGAGAACTTCAGATCGG
TGAAAGCTTAACCTCCAATGAGAGTCTTCCCCTCCTTGCAACAGAACATGCGGAGGAGGTTGTTCTTTTGGATCTCCCCCCCCTTG
TTGTTGACAACAATGTGCACATTGATCATGAGGAGGAGGTTGTTCTTTTGGATCTCCCCGCCCTTGCTGTTGACAACAATGTGCAC
ATTGATCATGCGGAGGAAGTTGTTCTTTTGGATCTCCCCCCCCTTGTTGTTGACAACAATGTGCACATTGATCATGAGGCTCAGGA
GGAGGTGGAGGAAAACGTTTTGCCCGATGTTGGAGCTCACAACATCCGTAACGTCCGAGGAAGGCCTAAGAGGAGACCATTCACTG
AGCCCCTCTCCCCACGCTCTCAAGCTAGGGTCAATGAGAGGGAAGCCAAGCAAGCGGCGCTCAAGAAAGCTGAGAACAGGAAGAAA
TCGAAATTAAATGTGCCAAACCACGATGGGTTGAAGAAAGCTGAGGAAGAGGCGCTCAAGAAAGCTCAGAAAGGGAAGAAATCGAA
ATTCAATGTGCCAAACACAAAGATGGGTTGAAGAATGCACGGAAACCACAATTGTAATCATTCCACTTCCACTCTTTCTCCTATCA
TTTTCAAGACTACTCTTAAAAACTTCTACTTATCTTTTTTCTGTCTGGACTCTTCTACTTTGTTATATCTGATGTAACATCTCTCT
TTGTCACCTGACTTTTGATTCGAGGAGTGATGATATAGTAATGCTTTTCTTTTGATGGGAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564254 Mediator complex, subunit Med10 [Arabidopsis thaliana]4371e-040
NP_973916 Mediator complex, subunit Med10 [Arabidopsis thaliana]4262e-039
NP_199006 Mediator complex, subunit Med10 [Arabidopsis thaliana]4145e-038
XP_002868569 hypothetical protein ARALYDRAFT_493793 [Arabidopsis lyrata subsp. lyrata]4073e-037
XP_002280081 PREDICTED: hypothetical protein [Vitis vinifera]4021e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q16G71 Mediator of RNA polymerase II transcription subunit 101598e-010
Q7Q5R5 Mediator of RNA polymerase II transcription subunit 101571e-009

TrEMBL top hits (Blast detail)Scoree value
Q93WN1 At1g26660/T24P13_44378e-041
Q3ED58 Putative uncharacterized protein At1g26665.24261e-039
Q9FHZ2 Genomic DNA, chromosome 5, P1 clone:MJC204143e-038
B9GK75 Predicted protein4029e-037
B9GY35 Predicted protein4001e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G26665.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).4374e-043
AT1G26665.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: RNA polymerase II mediator complex protein-related (TAIR:AT5G41910.1); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 83; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).4268e-042
AT5G41910.1 RNA polymerase II mediator complex protein-related4142e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  33%
 
181  17%
 
111  17%
 
122  33%

Unigene MembersMember information