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Information for unigene UN09786
| FASTA Sequence |
| Unigene ID: UN09786 | Length: 1253 |
SSR | | GGAGCTCGTTTCCTCTCTGCTTCTAATTTCTCTCACGATTCACTGAATCCAAGGCACACGGTGGCGCGATTGAAATTCAAATCGAT
ACTTTGCATCAATCTTGGTTGATTTTGCACCTGTGAGAGCCCAGATCCGAAGTTTCTTTCTTCTGGAACGAAGAAAATGCAAGCAA
GGCATGTGCAATCGTCGTATCGAGATCGGACGGACGAGTTCTCTGGTATCGTTGAAAGCCATCGGAGATCGATTGCTCCAGCGGCG
GCGAATAGTGCGCCTTATGGTGGTGGGGGAAGAGGAAGAGAGGATCCGAGATCTGCGGCGGCAAGTCAATCAGAGTTCAGTAAGAG
AGCTTCTCTGATCGGTTTAGCTATCCACCAGACGTCCCAGAAGCTATCCAAGCTCGCTCAACTGGCGAAGAGGTCATCAGTGTTTG
ATGATCCAACGCGGGAGATACAAGAGCTGACGGTTGTGATCAAACAAGAGATCTCTGGTTTAAACGGCGCTTTACTCGACCTCCAA
GCTGTACGCAACAACAACTCCCATGATAACGATGAAAGGAGCATCTCTAGAGACACCACTAGTCACTCTGCAACTGTTGTTGACGA
TCTCAAGAATCGCTTGATGGACACTACCAAGGAGTTTAAGGATGTTCTTACTTTGAGAACTGAGAACATGAAGATCCAAGAAGATC
GAATGAAAAAATTCTCTAAAATCTCTTCGAAAGAATCAGCAAATCCGTTTGTTCGCCAGCGTCCTTTGGCTTCTAAGCCTTCACCT
AGTCAACCTGCTCCTCTTCCATGGGCAAATGGTTCTTCTTCTTCATCGTCTCAGTTAGTCCCAAGTAGGCAGGGAGAGGCCGAATC
CTCACCACTATTGCAACAGAGTCAACAACAACAGCAGCAGCAGCAGATGGTCCCGTTGCAAGACACATATATGCAAAACCGAGCAG
AAGCTCTACACAATGTAGAATCAACAATCCATGAGCTAAGCAATATCTTCACACAACTAGCGACCATGGTTTCTCAGCAAGGGGAG
ATCGCTATCAGAATCGATCAGGACGTGGAAGATACATTGGCGAATGTGGAAGGCGCACAGAGCCAACTGGCTAGGTATCTCAACAG
TATATCGTCTAACCGATGGCTCATGATTAAGATTTTCTTTGTACTGATTGCTTTTCTCATGGTTTTCCTCTTCTTCGTTGCGTGAT
ATTGAAATAGATAAAGAAAATGATTCTTAACGAGTTTAAACATTATTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189078 syntaxin-32 [Arabidopsis thaliana] | 1265 | 7e-137 |
| XP_002883519 hypothetical protein ARALYDRAFT_899015 [Arabidopsis lyrata subsp. lyrata] | 1264 | 9e-137 |
| XP_002880717 hypothetical protein ARALYDRAFT_481441 [Arabidopsis lyrata subsp. lyrata] | 1238 | 1e-133 |
| XP_002515572 syntaxin, putative [Ricinus communis] | 1115 | 2e-119 |
| XP_002284775 PREDICTED: hypothetical protein [Vitis vinifera] | 1094 | 5e-117 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK09 Syntaxin-32 | 1265 | 3e-138 |
| Q9FFK1 Syntaxin-31 | 661 | 3e-068 |
| Q01590 Integral membrane protein SED5 | 401 | 5e-038 |
| O13644 Integral membrane protein sed5 | 275 | 2e-023 |
| Q13190 Syntaxin-5 | 271 | 6e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RPA3 Syntaxin, putative | 1115 | 1e-119 |
| A9P7V8 Putative uncharacterized protein | 1066 | 6e-114 |
| B9ILI6 Predicted protein | 1053 | 2e-112 |
| C5XMQ4 Putative uncharacterized protein Sb03g003820 | 988 | 6e-105 |
| B6TET0 Syntaxin 32 | 985 | 1e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24350.1 SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor | 1266 | 2e-139 |
| AT5G05760.1 SYP31 (SYNTAXIN OF PLANTS 31); SNAP receptor | 662 | 2e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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