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Information for unigene UN09788

FASTA Sequence
Unigene ID: UN09788Length: 956 SSRSNP
GGGGGTTCTCCGCCACACTAATCTCTCAGGAAGAGGAGCGAGCAGCCAAAAAAAAAAAAAGGAGGAAATGGTAGCGCTGAAGCAAC
AGAAGCGGCTCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCAAATGAAACCGCCGATATCTCCATGGCT
AACTCCCGCCAAAACATCAGGAAGTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTCGCTCCCGGGCCCG
CCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCTGGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGG
TACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACAGAGAGTCGAAGAAGATTGACAAGCACATGTACCAC
GACATGTACATGCGTGTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCACAAGTCCAAGGCCGAGAAAGC
CAGAGAGAAGACTTTGTCTGATCAGTTTGAGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGGAGAGAAG
AGCGTCTTGCTAAGGGTCCTGGTGGAGATGTCGAGCCTGCGACTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCA
GAGGTACCGAAGAAGAAGTCTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTCATTTTACTTGACTTGGAAGAAGTTTTTTGA
ATGTTTTATGAAGTTGCTTTTGTTGAAATACTTTCTTGGCGCAGAAAAACATAATTGTTATGCTTTTAAGGATTTTTTTAGCTTAT
CAGTTTACTTTCTTTTTCGAGACATTTTGTTCTCCATTCCTTTCTGAATGGTTTTTGTTATTCACTTAATCTAATCCACCGACACA
TGAATTTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171777 60S ribosomal protein L19-1 [Arabidopsis thaliana]9951e-105
XP_002892123 EMB2386 [Arabidopsis lyrata subsp. lyrata]9941e-105
AAL58923 At1g02780/T14P4_3 [Arabidopsis thaliana]9832e-104
ACJ84085 unknown [Medicago truncatula]9367e-099
NP_192132 60S ribosomal protein L19-3 [Arabidopsis thaliana]9242e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRX2 60S ribosomal protein L19-19954e-107
P49693 60S ribosomal protein L19-39247e-099
Q9LUQ6 60S ribosomal protein L19-28655e-092
Q3T0W9 60S ribosomal protein L196381e-065
P84098 60S ribosomal protein L196381e-065

TrEMBL top hits (Blast detail)Scoree value
Q8W101 Ribosomal protein L199832e-104
B7FH56 Ribosomal protein L199365e-099
C6T4I7 Ribosomal protein L199231e-097
B7FHF4 Ribosomal protein L199212e-097
A9PB34 Ribosomal protein L199169e-097

Arabidopsis top hits (Blast detail)Scoree value
AT1G02780.1 emb2386 (embryo defective 2386); structural constituent of ribosome10062e-109
AT4G02230.1 60S ribosomal protein L19 (RPL19C)9533e-103
AT3G16780.1 60S ribosomal protein L19 (RPL19B)8655e-093
AT4G16030.1 structural constituent of ribosome2095e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  42%
 
63  25%
 
94  33%

Unigene MembersMember information