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Information for unigene UN09797

FASTA Sequence
Unigene ID: UN09797Length: 1618  SNP
GAATCATCTGCTTCAGAACATTCGCAAATTCTAAAAGATGGATGTTGCGGTTGGCTAAATCTCCTTCACTGGCATTCCCTTTTAAT
GAGATGTGTCTGAGAAGAAACAACATTAATTTAACAACAACCGTAGATCATAACATCTCTAGATCAAACGATTCCATTGGTATGGA
ATATGAAGCTGGACATCATCATCATTCATCGTTCGTCACTTCAATAGTCTTCTTCTCATCCAATCTGTTTATTCCCTTGTCTTTGA
AAATCCCTATACGTGACGGTTTTCACGAGATTCTTCAATAACTTTTTTTTTCATACACCAAACTTTTGCTTTTAGATAGAAAAAAA
TTATATTGGGAGATTTATCCATCTCAAAAAGATGGAGGTTGTTGTTAGTGGGAAGAAAAGGATTATAAATCTTGATCTCAGTTCAC
GTTTGTTGTCTGAGCCTCTGATCCCGGGCTTGTCTGATGACGTGGCAAAGCTTTGTCTGGCGTTGGTTCCGCGTGCTAGCTTGCCT
TCCATGGGACGTGTCTGTAAGAAATGGAGGTATGTTGTCCAGAGCAGAGAGTTTATTACCGTGAGAAGACTCGCCGGTATGCTTGA
GGAGTGGCTATATGTCTTAACCATGGATGGTGGAGGGAAAGAGAGCCACTGGGAGGTGATGGACTGTCTGGGACATAAGCTATCAT
CTCTTCCACCAATGCCTGGTCCTGTAAAGACAGGGTTTAAGGTGGTTGTGGTCGACGGGAAGCTACTTGTGATTGCTGGTTGCGCT
ATGATCAATGGCTCTCATGTTGCATCTTCTGATGTTTATCAGTTTGATACTTGCCTCAACAGCTGGAGCAGACTAGCTGACTTGAA
GGAGGCTCGTTATGACTTTGCTTGCGCTGAGGTGAATGGGCTTGTTTACGTGGTGGGAGGTCACGGTGGAAATGGTGAGAGTCTGT
CTAGTGCGGAGGTTTACGATCCAGAGACGGGGATTCGGACTTTCATAGAGTCTCTGAGGCGTCCGAGATGGGGATGTTTCGCTAGC
GGCTTCAACGGGAAGCTATACGTGATGGGTGGGAGATCCAACTTCACCATTGGTAACTCAAAACTTGTTGATGTGTACAACCCTCG
GTGTGGTTCCTGGTGTGGCAGCAAAAACGGTGTAACTATGGTCACAGCTCATGTTGAAGTAGGAAAAAAACTATTCTGTATCGAGT
GGAAGAACCAGAGGAAGATGTCTGTCTTCAATGCAGAAGAAGATACTTGGGAAGTTGTGGCTCTACCGCTTTCAGGAAGCTCGAGG
GCAGGGTTTCAGTTTGGTAAGCTGAGTGGGAAGCTTCTTCTTTTTCCGTCTCAAGAAGAGACTGGTCACAGCACTTTGCTGTACGA
TCCGGATGCTGCACCAGGCAGGCAGTGGAAAACATCTGAGATAAAACTGTCTGGTTCCTGCGTATGCAGCGTCACAATCATAGCCT
GATTTTATGATGATCTTATTGATACCATTGTTGTCACATTTATCCATGATCCAAACTTAAAAGAGAGCGTTGAGTTTTACACTGAT
CTTTGATACAGTTTGAATAAAGTGGAGTGTGTGTGTTTTGTTTGACACTCTCTATCCGTTTGTTCCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176915 F-box/kelch-repeat protein [Arabidopsis thaliana]15992e-175
AAC18788 Contains similarity to beta scruin gb|Z47541 from Limulus polyphemus. ESTs gb|T04493 and gb|AA585955 come from this gene [Arabidopsis thaliana]15992e-175
XP_002887123 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]15902e-174
XP_002272745 PREDICTED: hypothetical protein [Vitis vinifera]12936e-140
XP_002311715 f-box family protein [Populus trichocarpa]12561e-135

Swiss-Prot top hits (Blast detail)Scoree value
Q9CAG8 F-box/kelch-repeat protein At1g6748015998e-177
Q9FZJ3 Putative F-box/kelch-repeat protein At1g274206311e-064
Q93W93 F-box/kelch-repeat protein At1g552703183e-028
Q9C6Z0 F-box/kelch-repeat protein At1g300902753e-023
Q9M1W7 F-box/kelch-repeat protein SKIP302242e-017

TrEMBL top hits (Blast detail)Scoree value
B9HKY9 F-box family protein12568e-136
B9MWF5 Predicted protein12423e-134
B9HT85 F-box family protein12111e-130
B9RMG2 Protein AFR, putative12083e-130
A5BA49 Putative uncharacterized protein11601e-124

Arabidopsis top hits (Blast detail)Scoree value
AT1G67480.1 kelch repeat-containing F-box family protein16005e-178
AT1G67480.2 kelch repeat-containing F-box family protein16005e-178
AT1G27420.1 kelch repeat-containing F-box family protein6256e-065
AT1G55270.1 kelch repeat-containing F-box family protein3182e-029
AT1G30090.1 kelch repeat-containing F-box family protein2752e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  22%
 
112  22%
 
64  44%
 
81  11%

Unigene MembersMember information