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Information for unigene UN09804

FASTA Sequence
Unigene ID: UN09804Length: 771  SNP
TTTTTTTTTAGCAGAGACTGATTACTTTATTTCATAGTTTATCATGGATACATCATAACAAGCTGAGAAATAACGGAAAGACACTT
TATTTATTTATTTATTTTTATTTTTTTTGTCTCTGAAAGACACTTTATTTAGTAAAACCATATAGTATAAGATCAAGAACGCTTCA
CAGCTAGCTTGTTGAAACATCTTACCCTTTGATGGCCTTAACATTTGGGATCACAGGCCTCACATAGAAACCAATAGATTTCAACT
GACCATGTTCGATAGTTCCAAAGAAACCTCCAAACTCACGGCGTTCAAGTATCCCTGAATGAAACTCCATCTTCTTAAGACCAAAT
TCTCCTGGATCGACTGTCCAGTGAACCGCATAGTGAGTACGTTCATTTGTATGAAACGCCAGCGAGGAAATGTAACCATTGTATAC
CTCCCCGTGAATCCCAGTCACAAACTCTGTCTCATGATTTAGCCTCAAAATTCGCCTGCTACAGTCAGATGATGATGAACCGTACG
TTTCAGACATGACAACAGATCCATCCTCGACATATCCAAACTGAATTGAAGTTACTCCGTGTTTGTTAAAGGATACGTTTATATGA
GATATTACATTGTGGAGCGTTTCTGCCCATTCGAAGCACCCAGAGCCTCTACTGGATTGACCAATCGGGCCCATTGCTATCATCTG
CATAACATTTTTTATTTATTTTTTTCTGTCACGAACCATCTGCATAACTATAAAGCAAGGTATGTACTCTGTAGTCTGTCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881925 hypothetical protein ARALYDRAFT_903775 [Arabidopsis lyrata subsp. lyrata]3594e-032
XP_002881928 hypothetical protein ARALYDRAFT_346189 [Arabidopsis lyrata subsp. lyrata]2062e-014
ABA40466 unknown [Solanum tuberosum]1632e-009
AAK43842 Unknown protein [Arabidopsis thaliana]1506e-008
NP_172067 protein restricted tev movement 1 [Arabidopsis thaliana]1481e-007

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84X07 Putative uncharacterized protein At2g43730/F18O19.162302e-017
Q3HVK8 Putative uncharacterized protein1631e-009
Q94K20 Putative uncharacterized protein At1g05760; T20M3.21504e-008
D5K1X7 Restricted tev movement 11487e-008
D5K1Y9 Restricted tev movement 11487e-008

Arabidopsis top hits (Blast detail)Scoree value
AT2G43730.1 lectin-related2363e-020
AT1G05760.1 RTM1 (restricted tev movement 1); sugar binding1961e-015
AT1G05770.1 jacalin lectin family protein1744e-013
AT2G43740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: lectin-related (TAIR:AT2G43730.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1252e-007
AT2G43740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: lectin-related (TAIR:AT2G43730.1); Has 18 Blast hits to 18 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1243e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1010  71%
 
114  29%

Unigene MembersMember information