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Information for unigene UN09846

FASTA Sequence
Unigene ID: UN09846Length: 1398  SNP
GGACGACTTTGATCCACAACACCAACTTCATCTTTCACCTCTCGATCTCAGTTAACCGGTACATTTAATTATCTAAAGAATGGAGT
TAAAGAGCATCAAGGACGCGTTTGATCGTGTTGCGAACAAGCACAAACTCTCGTACGCCAAAACGCACGAGATCGTTCAGTTGCTT
TCTCAAGAAATCCACAAGGCGTTGAGCTTAATCCAGGACACTCAGTTTGATCACAGGTCCATTCTCCTCGACGTCAAGAAACTCTT
CATGGAGAGGTCTCCAGGGACACAACTCGAATCCGCTGAGAAAGAACTCAACGTGGCTCTCACCAAGTACCCCAAAGTTCTCGAGA
AGCAGCTCAACTCCGAGATATCGAAGGCTTACAGAAACAACGTCGAGTTCGATACTCATGTGGTGAACCAGATCATCGCTAACTTC
TTCTACCGTCAGGGGATGTTTGAGATCGGTGACTGTTTCGTTGCCGAGACTGGTGAATCTGAGTGTACGACTAGGCAGTCTTTCGT
GGAGATGTTTATGATACTAGAGGCTATGAAGGGGAGAGATCTTGAACCGGCTCTTAACTGGGCGGCGGCTAACTCTGAGAGGCTGA
AGCAAGCGAGGTCTGATCTCGAGATGAAGCTTCACAGCTTACAGTTTTTGAAAATATCTCAAGGCCAAAACTCACAAGAGGCTCTC
AGCTACGCGAGGAGACATTTTGCAGTGTACGCGGATAGCTGCCTCTCCGAGATTCAGAAGCTCGTTTGTTCTCTCTTATGGGACAA
GAACCTGGAGCAGTCACCGTACTCGGAGTTTCTCTCTCCCGTTATGTGGGACAACGCGGTGAGAGAGCTGACGCGGCAGTACTGCA
ACCTACTCGGTGAATCGTCTGAGAGTCCGCTGAGTGTGACGGTAACGGCCGGTACGCAGGCTTTACCTGTGCTGTTGAAATACATG
AACGTGATAGCGAACAAGAAGCTCGATTGGCAGACTATGGAGCAGCTTCCCGTGGCCGTGGAACTACCCGGGGAGTTTCAGTTTCA
TTCGGTGTTTGTATGTCCCGTCTCCAAGGAACAGTCGAGTGAAGATAATCCTCCGATGATGATGTCTTGTGGCCACGTGCTTTGCA
AGCAGACTATCACTAGAATGTCTAAGAATGGCGCTAAGACTTCTTTCAAGTGTCCTTATTGCCCGACCGATGTAGACTCCACAAGG
TGCAAGCAGTTACACTTCTGACCGGAAGATTGGAACTGAAAGTTCTGACCGGTGTTGGAATGTATTGCTGCTGTGTTCTTTTTCGT
TCAAGGTTTTCATGTACAAAAATCATCAGGGAAGGTTTAGATAATTCGGACATTCCCCCAACCATAAGAACGTGTCTGTGTTTGTT
CAAACTTTCTAAATATATAAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868961 protein binding protein [Arabidopsis lyrata subsp. lyrata]16601e-182
NP_195501 LisH/CRA/RING-U-box domain-containing protein [Arabidopsis thaliana]16295e-179
XP_002880454 hypothetical protein ARALYDRAFT_481130 [Arabidopsis lyrata subsp. lyrata]13142e-142
AAM65529 unknown [Arabidopsis thaliana]13024e-141
NP_565541 zinc ion binding protein [Arabidopsis thaliana]13007e-141

Swiss-Prot top hits (Blast detail)Scoree value
Q6GLP4 Protein RMD5 homolog A5153e-051
Q640V2 Protein RMD5 homolog A5136e-051
Q9H871 Protein RMD5 homolog A5073e-050
Q80YQ8 Protein RMD5 homolog A4992e-049
Q91YQ7 Protein RMD5 homolog B4957e-049

TrEMBL top hits (Blast detail)Scoree value
Q9T075 At4g3788016293e-179
Q8LA81 Putative uncharacterized protein13023e-141
Q9ZQ45 At2g2269013005e-141
B9I4M0 Predicted protein11761e-126
B9ICU0 Predicted protein11706e-126

Arabidopsis top hits (Blast detail)Scoree value
AT4G37880.1 protein binding / zinc ion binding16301e-181
AT2G22690.1 protein binding / zinc ion binding13074e-144
AT2G22690.2 protein binding / zinc ion binding13074e-144
AT5G09630.1 protein binding / zinc ion binding8291e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  64%
 
181  9%
 
191  9%
 
121  9%
 
61  9%

Unigene MembersMember information