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Information for unigene UN09851
| FASTA Sequence |
| Unigene ID: UN09851 | Length: 1012 |
SSR | | GGGAAAACGAGTTTCGTTTCCCTCTCAACAACCTCCCTTTTTCTACTTCACTCCGCTTCTCCCAAACTCTCTCATCGATTCGATCT
CAAAAGAAAAAAAAAGATTACATTCTCTCCTTCCGATCTAGAAAAACGAAAGAGATGGCCGGTGGTGGTTCGAAATCAACTGCGCC
CAAGGCGAGGAAGAGAGTCGATGCTGAAACCAAACCCGAAACCACCGCTAACAACAACAACAACAACATCAACACCTTACTTCGCG
CTAAAGACGGCAGCGCCTTCGTTCGATGCGAAGGATGCAACAAGAACGTAGCGGTTGCGCTTATCAGTATGCATAACTGTAGCCTC
GACGCTAAAATTCGTGTCAATCTCGAAGCTCAAGTTGTTGAGACACAAACCGAAGCTAAGAAGAAACCTGTTGAGAGGAAGAAGTC
AACATCTGATGAACCTAAGGCAAAGAGACTTAGGAAGGCCAAGGATGAGAATAAGAAGAAGAGCTCTTCTTCCTCTAACAAACCCA
AGCGACCTCTTACTGCTTTCTTCATCTTCATGGCTGATTTCCGCAAAACTTTTAAAGAAGAGAATCCTGACGCTGGCGTTAAGGAT
GTTGCAAAACAGGGTGGTGAAAAGTGGAAGTCTTTGGATGAGGAAGAGAAGAAAGTTTATTTGGATAAATCTGCTGAACTAAAGGC
AGAGTATAACAAGTCACTTGAGAGCAACAACGATGCTGATGAGGAAGAAGTGGATGAGGAGAAGAAGCTGATGATGTTGATGAGGC
TGAGGAGAAACAGTCTGATGAGGCTGAGGAGAAGCAAACTGATGAGGCTGAGGAGAATGAAGCTGAGAACAAAGAGGCTGAAGGTA
AAGAAGAGGAAGATGAGATTTTGGATGACTTCTAGACATGTTAAATCTTTCTTTTGGTTTAAATCTCAATGAAATGGATTCAACTC
TTTATCCTGATGGTGCATTGTAAATTTTGAACTTTCATTAGTTATCTTAAGATGGTTGGTGTGAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568431 high-mobility group B6 protein [Arabidopsis thaliana] | 689 | 3e-070 |
| XP_002874129 hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp. lyrata] | 659 | 1e-066 |
| XP_002873936 hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp. lyrata] | 624 | 1e-062 |
| XP_002310906 high mobility group family [Populus trichocarpa] | 533 | 4e-052 |
| XP_002513135 DNA-binding protein MNB1B, putative [Ricinus communis] | 504 | 9e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q32L31 High mobility group protein B3 | 190 | 1e-013 |
| O15347 High mobility group protein B3 | 185 | 4e-013 |
| Q05344 FACT complex subunit Ssrp1 | 185 | 4e-013 |
| O54879 High mobility group protein B3 | 183 | 7e-013 |
| P07746 High mobility group-T protein | 183 | 7e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDF9 Putative uncharacterized protein | 689 | 2e-070 |
| A9PB77 High mobility group family | 533 | 3e-052 |
| B9RGI3 DNA-binding protein MNB1B, putative | 504 | 6e-049 |
| A5BH75 Putative uncharacterized protein | 495 | 7e-048 |
| Q9FHL6 Genomic DNA, chromosome 5, TAC clone:K19M13 | 491 | 2e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23420.1 HMGB6; transcription factor | 689 | 1e-072 |
| AT3G51880.1 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 252 | 6e-022 |
| AT3G51880.2 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 252 | 6e-022 |
| AT3G51880.3 HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 252 | 6e-022 |
| AT1G20696.2 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 231 | 2e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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