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Information for unigene UN09888

FASTA Sequence
Unigene ID: UN09888Length: 761  SNP
CACAGGGCAGAACTAGAAGTTCTTTCAATCAATAGGAATCAAGAGGATGATGATACAGAAGGTTGTTCAAGAATCAGAAGGTTGAG
TTCTAATGGTGATTGTAGTTTTCAACTAATAAGATAAAATATTACTCAACAGTCAATAAATACATAGTTACATCATATTATTATTA
TGCATAGCTCTGCTCCACAATCTCCATAACTTTCCTGTTGTACTCTCGTTTGTTCTCACTGAACAGCCTCGCAGCTTCAGAGTTCG
CTGGCGAGTTAGGATTTGGATCACAAAGCAGAGACTGAATAGATGTGAGGATTGCTGAGACATCATAAATGGGACTCCACTGGTTT
TGTAATATATCCAAGCAAATGCTTCCATCAGCATAAATGTTTGGATGAAACATCCTTGAAACAAAGCGAACTACTGGTGGTTTGTT
TGGGTAGTCCTCGGTGAACTGAAGAGACAACTTGAAGGTACCTCCATCCCATGGACTGTCATCAGGTCCAAAGATGAGAGCGTTCC
AATGCATGATGTTGTTATCTTGAGGAGCTCCACTGATCCCCAAGGGAGGATCTTTCTGTAGTCTCTTGAAGTCCCACATGAGTCTC
TTCCGAGCTGGAGTTGCCATTTGCTTGAAAACAAACAAGACTGAAATTCAAAGCTTGATTGAAGAACAATCCAGCAAAGGAGACGA
TGAAGAAAATGGGTAGAGGATAGCAACAGAATAATAACAGAGATTTTTTAAGAGAGAGAATCAAAGAAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864799 ubiquitin-conjugating enzyme 29 [Arabidopsis lyrata subsp. lyrata]7716e-080
NP_568956 ubiquitin-conjugating enzyme E2 3 [Arabidopsis thaliana]7644e-079
AAN28744 At5g62540/K19B1_15 [Arabidopsis thaliana]7483e-077
AAK82529 AT5g62540/K19B1_15 [Arabidopsis thaliana]7421e-076
ACF06444 ubiquitin carrier protein [Elaeis guineensis]7421e-076

Swiss-Prot top hits (Blast detail)Scoree value
P42746 Ubiquitin-conjugating enzyme E2 37642e-080
P35130 Ubiquitin-conjugating enzyme E2 27337e-077
P42745 Ubiquitin-conjugating enzyme E2 27302e-076
P25866 Ubiquitin-conjugating enzyme E2 27256e-076
P25865 Ubiquitin-conjugating enzyme E2 17248e-076

TrEMBL top hits (Blast detail)Scoree value
B3TLL3 Ubiquitin carrier protein7421e-076
A2XMS9 Ubiquitin carrier protein7411e-076
Q8SBC1 Ubiquitin carrier protein7411e-076
A9NMK1 Ubiquitin carrier protein7374e-076
A9PBR0 Ubiquitin carrier protein7374e-076

Arabidopsis top hits (Blast detail)Scoree value
AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 3); ubiquitin-protein ligase7651e-081
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase7301e-077
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase7247e-077
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase7247e-077
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3662e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  20%
 
96  60%
 
122  20%

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