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Information for unigene UN09898
| FASTA Sequence |
| Unigene ID: UN09898 | Length: 1026 |
SSR | | GGAATATGATAATCTGAGGTTATAACAGCAATTCGCTTAGACAAGAAGTAAAGTAGAAGCTAGTTTAAACACCAAAGTAGGTCTTA
CAACATGAAGGAGACGACATAAGAAACACATAGAAACCATACAGATGACGGGACAGGAAGACTGGCAACACTGAAACTGTGAACTA
ACATCTTTTCATTTAGAAGGAGTCTTCGAGTCTCTAGATTTTGTTAAACGCAACAATGTCGACGCTTTGGATGTACTCGTTGTTAG
GCTCTGAGGTGAGATGGTCTTCAATGAGGTTGTCCACAGAGACAAGGTCATCATCAATTGTCATCATTATAGTGAGTTTCTTTATC
CCGTAACCAACCGGTACCAATTTCGAAGCTCCCCAATAGAGACCAGGCATCTGAACACTACGGACAGCTTCTTCCAACTTCTTCAT
ATCGGTTTCATCATCCCATGGCTTTACGTCAAGTAGCACAGATGACTTTCCACTCTCTTTAGGTTTCTTGGTATCTTTCTTAGCAG
CTTCCCTCTCCTCTGCAGCCTTTTTCTCATCTTCTGTCTCATCAGCAAAAAGATCAATATCATCATCATCATCATCAGCAGTAGCA
TCAGCTCCAGAAGCAGCAGCAGGTGCCTCTGTTTTCGGAGTTCCGGACTGAGCAACACCGCCACCAATTTTCACTCCGACAACTTT
CCCGGGAAAACTTTTAGCAAGATGGGAAGCAACGGTATCATACCACTTGCTAACGTTTGGGAAACCATCACCTGGTTTCTCCAACA
CGGCAGCATAAACCTTCACATCATCCACTGAAAACTTATCGCCGGAGATGTAAGTTTTCCCAGAGAGGTGTTCCTCAACGGTTTTG
AGACCTTGCTCTGTGTGGAGATTTGAAAACGCAATCGCCATCGATGCTCAAATTATTATGCTGAAGTGGAAGTGACCAAGAGAGAA
TATGCCGCTTTAAAAAAGGCTGTGTGTGTGTGTAATAATACTCTAGAAACTCCTCAACCTGTCAGACCGGTCTAACGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 1046 | 1e-111 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 978 | 1e-103 |
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 914 | 3e-096 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 908 | 1e-095 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 901 | 8e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84WM9 Elongation factor 1-beta 1 | 990 | 2e-106 |
| Q9SCX3 Elongation factor 1-beta 2 | 931 | 1e-099 |
| P29545 Elongation factor 1-beta | 807 | 3e-085 |
| P93447 Elongation factor 1-delta | 656 | 1e-067 |
| P48006 Elongation factor 1-delta 1 | 655 | 1e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 978 | 7e-104 |
| B9GEM9 Predicted protein | 798 | 5e-083 |
| A9P7W8 Predicted protein | 797 | 7e-083 |
| Q1XG58 Putative elongation factor | 756 | 4e-078 |
| A9NML6 Putative uncharacterized protein | 742 | 2e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 991 | 1e-107 |
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 932 | 8e-101 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 660 | 3e-069 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 656 | 9e-069 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 651 | 3e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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