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Information for unigene UN09902
| FASTA Sequence |
| Unigene ID: UN09902 | Length: 1108 |
| SNP | CACCCAAAATATTCCTACTTCATTACTCACTAGCCAAGAGAAATAAAAGAAAAGAAATTTACTTTTTTTACACGGAAAAAAATAAT
TAAACACCATAAGAATTTATTTTCCCCATTATATGCAAATATTAGTTAACATTATAAATTCGACCCTATTTTTTACTTTTTTATCA
CAAAACCCTCTTAGATTGGTTCTTCTTGCTTCTCTCATTTCATCTTGAACTTGAAGCCTTGAGTAGTGATTTAGCATAAGCTAATG
GCAACGCTGCAATTTTCTTGGCTTTCCCTACATAAGCTCTCTTTGTAAAGTTGTTGTAATCATTCGCTTCAATCTCGTCCAATATC
CTCCTGTACAATAGGAGCGATGCCCATACGGGCCATCTGCTAGCTGCGTCAAGCTCGGTAACACCTTTCTCAGCTTCATCAAAGAA
CATTCTTGCTCGCTTGAGCTGCATTTTCATGAAGTTTCTCCATTTATCAGTGACTTTTCCAGCGAATATGTCTTCATCCGAGAGAC
CAGCTTGAGCTAGTTCATCTTGGGGTAGATAAACCCTTCCTCTTCTCGCATCTTCACCAACGTCTCTGAGTATGTTGGTAAGTTGA
TTGGCTATACCGAGGGCCAAGGCAGCGTTGTAAACACTCTCGGTTGTTGCTTTGGACTTAGGATCGATCCCCATAACCGGAACGCT
CATCAAACCAACGGTTCCAGCAACATAGTAGCAGTAAAGGTAGAGATCATCAAAGGAGTTGTATCTAGACTTCCTCAAATCCATTC
TCATTCCTTCTATCATGTCTCTAAATGGCTGAATATCGACAGGGTATGTAGCAACAGTATCAGAGAGGGCAGCGTCAAGCATACCG
AAAGGACGGCCACGGAAAAGATCTTCTAACCTTGCTTCCCATCTATCTAACGCCATTGGAGTTATGTGTGATGCATTAGGTCCATC
TACCAGTTCATCAGTTCTTCTACACCAAACATAGATAGCCCAAATGGCCCTGCGTCTCTCAGGTGTCATAAGCAAAGTTCCGAGAT
AAAAAGTTTTAGCATATTCAGCACAAACTTCACCGCAACGATCATAAGCTTCACCCAACAAACTCAAACCCCCAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| ACT20708 chloroplast phytoene synthase [Brassica rapa] | 1499 | 4e-164 |
| XP_002873817 phytoene synthase [Arabidopsis lyrata subsp. lyrata] | 1494 | 2e-163 |
| NP_197225 phytoene synthase [Arabidopsis thaliana] | 1491 | 4e-163 |
| AAM62787 phytoene synthase [Arabidopsis thaliana] | 1491 | 4e-163 |
| ACI62510 chromoplast phytoene synthase [Brassica rapa subsp. pekinensis] | 1488 | 8e-163 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P37271 Phytoene synthase, chloroplastic | 1491 | 2e-164 |
| P37273 Phytoene synthase 2, chloroplastic (Fragment) | 1355 | 9e-149 |
| P37272 Phytoene synthase, chloroplastic | 1352 | 2e-148 |
| P08196 Phytoene synthase 1, chloroplastic | 1339 | 7e-147 |
| P49293 Phytoene synthase, chloroplastic | 1339 | 7e-147 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C7DR83 Chloroplast phytoene synthase | 1499 | 3e-164 |
| B6V1Z8 Chromoplast phytoene synthase | 1488 | 6e-163 |
| B2CNE7 Phytoene synthase | 1486 | 1e-162 |
| B9MWW1 Predicted protein | 1393 | 6e-152 |
| Q2I739 Phytoene synthase | 1381 | 1e-150 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G17230.1 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 1491 | 1e-165 |
| AT5G17230.2 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 1491 | 1e-165 |
| AT5G17230.3 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 1269 | 8e-140 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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